RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TRAV12-3A0A0B4J271 114 aa7.32□□□□□ -1.24
SMG1-205ENST00000561947 NXPH4O95158 308 aa7.32□□□□□ -1.24
SMG1-205ENST00000561947 LGALS9BQ3B8N2 356 aa7.32□□□□□ -1.24
SMG1-205ENST00000561947 LGALS9CQ6DKI2 356 aa7.32□□□□□ -1.24
SMG1-205ENST00000561947 Q6ZSV7 163 aa7.32□□□□□ -1.24
SMG1-205ENST00000561947 ITPR3Q14573 2671 aa7.32□□□□□ -1.24
SMG1-205ENST00000561947 DUSP14O95147 198 aaKnown RBP7.31□□□□□ -1.24
SMG1-205ENST00000561947 NUTF2P61970 127 aaKnown RBP7.31□□□□□ -1.24
SMG1-205ENST00000561947 KHDC1LQ5JSQ8 128 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 OR11H1Q8NG94 326 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 DPF1Q92782 380 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 TENM4Q6N022 2769 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 KRTAP1-1Q07627 177 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 FOXI2Q6ZQN5 318 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 C14orf178Q8N769 122 aaPredicted RBP7.31□□□□□ -1.24
SMG1-205ENST00000561947 OR1N2Q8NGR9 330 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 AP1S3Q96PC3 154 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 PEMTQ9UBM1 199 aa7.31□□□□□ -1.24
SMG1-205ENST00000561947 MRPS16Q9Y3D3 137 aaKnown RBP7.31□□□□□ -1.24
SMG1-205ENST00000561947 MUC4Q99102 2169 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 IGKV3-20P01619 116 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 GOLT1BQ9Y3E0 138 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 BATFQ16520 125 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 KLHL30-AS1Q8NEE0 82 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 OR9G4Q8NGQ1 327 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 TMEM158Q8WZ71 300 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 DUX3Q96PT4 197 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 FOXC2Q99958 501 aa7.3□□□□□ -1.24
SMG1-205ENST00000561947 KMT2BQ9UMN6 2715 aaPredicted RBP7.29□□□□□ -1.24
SMG1-205ENST00000561947 TRAV12-2A0A075B6T6 113 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 AGRNO00468 2067 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 CD5LO43866 347 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 MGPP08493 103 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 CD7P09564 240 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 CDKN1BP46527 198 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 C18orf15Q96N68 181 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 TRAV2A0A0B4J234 112 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 LAGE3Q14657 143 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 SPINK13Q1W4C9 94 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 RASL10AQ92737 203 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 SMIM2Q9BVW6 85 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 ESM1Q9NQ30 184 aa7.29□□□□□ -1.24
SMG1-205ENST00000561947 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
SMG1-205ENST00000561947 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 AMTNQ6UX39 209 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 POM121L12Q8N7R1 296 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 DLX4Q92988 240 aaPredicted RBP7.28□□□□□ -1.24
SMG1-205ENST00000561947 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 YAE1D1Q9NRH1 226 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 KIF25-AS1Q9Y6Z4 181 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 IGHV3-16A0A0C4DH30 117 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 TCAPO15273 167 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
SMG1-205ENST00000561947 OXLD1Q5BKU9 147 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 RPL39LQ96EH5 51 aaKnown RBP7.28□□□□□ -1.24
SMG1-205ENST00000561947 C9orf85Q96MD7 179 aa7.28□□□□□ -1.24
SMG1-205ENST00000561947 IGHV1OR15-1A0A075B7D0 117 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 TMEM61Q8N0U2 210 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 TP73-AS1Q9UF72 201 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 CHD6Q8TD26 2715 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 SMIM17P0DL12 118 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 FOSL1P15407 271 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 LINC00315P59091 139 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 DEFB131AP59861 70 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 HIST2H2BDQ6DRA6 164 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 PDZD2O15018 2839 aa7.27□□□□□ -1.25
SMG1-205ENST00000561947 KNCNA6PVL3 124 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 A8MTW9 85 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 ATP5LO75964 103 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 PPP1R17O96001 155 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 COX8AP10176 69 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 DYNLRB2Q8TF09 96 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 DKK2Q9UBU2 259 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 ZMAT5Q9UDW3 170 aaKnown RBP7.26□□□□□ -1.25
SMG1-205ENST00000561947 TLN2Q9Y4G6 2542 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 HLA-DRB4P13762 266 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 Q8N1Y9 231 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 MDFICQ9P1T7 246 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 HLA-DRB4X5D2U9 266 aa7.26□□□□□ -1.25
SMG1-205ENST00000561947 FLNAP21333 2647 aaKnown RBP7.26□□□□□ -1.25
SMG1-205ENST00000561947 K7EMI3 77 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 NUDT3O95989 172 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 HINT1P49773 126 aaPredicted RBP7.25□□□□□ -1.25
SMG1-205ENST00000561947 ODF1Q14990 250 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 ORMDL2Q53FV1 153 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 LINC00469Q8N7U9 141 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 STPG4Q8N801 248 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 RAX2Q96IS3 184 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 JPT2Q9H910 190 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 PRSS1P07477 247 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 DEFB114Q30KQ6 69 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 ZMAT4Q9H898 229 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 SORL1Q92673 2214 aa7.25□□□□□ -1.25
SMG1-205ENST00000561947 SONP18583 2426 aaKnown RBP7.24□□□□□ -1.25
SMG1-205ENST00000561947 H3BMM0 161 aa7.24□□□□□ -1.25
SMG1-205ENST00000561947 RNASE1P07998 156 aaKnown RBP7.24□□□□□ -1.25
SMG1-205ENST00000561947 CD28P10747 220 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms