RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 HIGD1CA8MV81 97 aa9.09□□□□□ -0.95
CMTM4-203ENST00000561680 ARMS2P0C7Q2 107 aa9.09□□□□□ -0.95
CMTM4-203ENST00000561680 FOXA3P55318 350 aaPredicted RBP9.09□□□□□ -0.95
CMTM4-203ENST00000561680 IMMP2LQ96T52 175 aa9.09□□□□□ -0.95
CMTM4-203ENST00000561680 SSBP4Q9BWG4 385 aaPredicted RBP9.09□□□□□ -0.95
CMTM4-203ENST00000561680 ZMAT4Q9H898 229 aa9.09□□□□□ -0.95
CMTM4-203ENST00000561680 SNURFLB1AK76 121 aa9.08□□□□□ -0.96
CMTM4-203ENST00000561680 LYZL1Q6UWQ5 148 aa9.08□□□□□ -0.96
CMTM4-203ENST00000561680 SPXQ9BT56 116 aa9.08□□□□□ -0.96
CMTM4-203ENST00000561680 C11orf68Q9H3H3 251 aaKnown RBP9.08□□□□□ -0.96
CMTM4-203ENST00000561680 NAT8BQ9UHF3 227 aa9.08□□□□□ -0.96
CMTM4-203ENST00000561680 TIMM8BQ9Y5J9 83 aaPredicted RBP9.08□□□□□ -0.96
CMTM4-203ENST00000561680 F2Z2F3 143 aa9.07□□□□□ -0.96
CMTM4-203ENST00000561680 NXPH4O95158 308 aa9.07□□□□□ -0.96
CMTM4-203ENST00000561680 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
CMTM4-203ENST00000561680 NUP35Q8NFH5 326 aa9.07□□□□□ -0.96
CMTM4-203ENST00000561680 PGLYRP4Q96LB8 373 aa9.07□□□□□ -0.96
CMTM4-203ENST00000561680 TPPP3Q9BW30 176 aa9.07□□□□□ -0.96
CMTM4-203ENST00000561680 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
CMTM4-203ENST00000561680 CXorf65A6NEN9 183 aa9.06□□□□□ -0.96
CMTM4-203ENST00000561680 M0R2P5 195 aa9.06□□□□□ -0.96
CMTM4-203ENST00000561680 DEFB4AO15263 64 aa9.06□□□□□ -0.96
CMTM4-203ENST00000561680 SPINK4O60575 86 aa9.06□□□□□ -0.96
CMTM4-203ENST00000561680 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
CMTM4-203ENST00000561680 OR10AG1Q8NH19 301 aa9.06□□□□□ -0.96
CMTM4-203ENST00000561680 PTH2Q96A98 100 aa9.06□□□□□ -0.96
CMTM4-203ENST00000561680 NOP10Q9NPE3 64 aaKnown RBP9.06□□□□□ -0.96
CMTM4-203ENST00000561680 PHLDA3Q9Y5J5 127 aa9.06□□□□□ -0.96
CMTM4-203ENST00000561680 IGHV4-4A0A075B6R2 117 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 EMP1P54849 157 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 FAM3BP58499 235 aaPredicted RBP9.05□□□□□ -0.96
CMTM4-203ENST00000561680 CACNG7P62955 275 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 LGALS9BQ3B8N2 356 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 WDR73Q6P4I2 378 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 KCNIP4Q6PIL6 250 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 ZFP82Q8N141 532 aa9.05□□□□□ -0.96
CMTM4-203ENST00000561680 TRAV9-1A0A075B6T8 112 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 MUC21A0A0G2JKD1 596 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 MUC21A0A140T8X8 626 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 A0A1B0GUT8 65 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 M0R381 172 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 S100PP25815 95 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 SPANXN1Q5VSR9 72 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 Q6ZTI0 123 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 CBLN2Q8IUK8 224 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 SYT8Q8NBV8 401 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 RASL10AQ92737 203 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 BORCS7Q96B45 105 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 NDUFAF3Q9BU61 184 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
CMTM4-203ENST00000561680 DKK2Q9UBU2 259 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 URGCP-MRPS24S4R325 110 aa9.04□□□□□ -0.96
CMTM4-203ENST00000561680 TRGV1A0A0A0MS02 117 aa9.03□□□□□ -0.96
CMTM4-203ENST00000561680 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
CMTM4-203ENST00000561680 TEX48A0A1B0GUV7 120 aa9.03□□□□□ -0.96
CMTM4-203ENST00000561680 DMRTA1Q5VZB9 504 aa9.03□□□□□ -0.96
CMTM4-203ENST00000561680 TMEM88Q6PEY1 159 aa9.03□□□□□ -0.96
CMTM4-203ENST00000561680 BTF3L4Q96K17 158 aa9.03□□□□□ -0.96
CMTM4-203ENST00000561680 SMCO4Q9NRQ5 59 aa9.03□□□□□ -0.96
CMTM4-203ENST00000561680 A0A1B0GXF2 115 aa9.02□□□□□ -0.97
CMTM4-203ENST00000561680 SCO1O75880 301 aa9.02□□□□□ -0.97
CMTM4-203ENST00000561680 NTF3P20783 257 aa9.02□□□□□ -0.97
CMTM4-203ENST00000561680 ATP5L2Q7Z4Y8 100 aa9.02□□□□□ -0.97
CMTM4-203ENST00000561680 YPEL4Q96NS1 127 aa9.02□□□□□ -0.97
CMTM4-203ENST00000561680 MSRB1Q9NZV6 116 aa9.02□□□□□ -0.97
CMTM4-203ENST00000561680 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
CMTM4-203ENST00000561680 A0A1B0GW15 77 aa9.01□□□□□ -0.97
CMTM4-203ENST00000561680 SPART-AS1P0CW21 52 aa9.01□□□□□ -0.97
CMTM4-203ENST00000561680 SSTP61278 116 aa9.01□□□□□ -0.97
CMTM4-203ENST00000561680 RIGQ13278 110 aa9.01□□□□□ -0.97
CMTM4-203ENST00000561680 ELOBQ15370 118 aa9.01□□□□□ -0.97
CMTM4-203ENST00000561680 MRPL54Q6P161 138 aaKnown RBP9.01□□□□□ -0.97
CMTM4-203ENST00000561680 AP1S3Q96PC3 154 aa9.01□□□□□ -0.97
CMTM4-203ENST00000561680 STAB2Q8WWQ8 2551 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 GAGE12BA1L429 117 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 A8MWV9 139 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 GAGE7O76087 117 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 TRGC1P0CF51 173 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 GAGE12FP0CL80 117 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 GAGE12GP0CL81 117 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 GAGE12IP0CL82 117 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 HBBP68871 147 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 TWIST1Q15672 202 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 C18orf15Q96N68 181 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 JPT2Q9H910 190 aa9□□□□□ -0.97
CMTM4-203ENST00000561680 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 TGIF2-C20orf24A0A0A6YYL0 155 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 TRAV4A0A0B4J268 109 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 RS1O15537 224 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 DAD1P61803 113 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 CFAP126Q5VTH2 177 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 RASL11AQ6T310 242 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 POM121L12Q8N7R1 296 aa8.99□□□□□ -0.97
CMTM4-203ENST00000561680 GATD1Q8NB37 220 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms