RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 E7EQ34 232 aa-0.7□□□□□ -2.52
PSMA4-221ENST00000560842 PFDN1O60925 122 aa-0.7□□□□□ -2.52
PSMA4-221ENST00000560842 OR2H2O95918 312 aa-0.7□□□□□ -2.52
PSMA4-221ENST00000560842 RPL22P35268 128 aaKnown RBP-0.7□□□□□ -2.52
PSMA4-221ENST00000560842 ATPIF1Q9UII2 106 aa-0.7□□□□□ -2.52
PSMA4-221ENST00000560842 PLXNA2O75051 1894 aa-0.71□□□□□ -2.52
PSMA4-221ENST00000560842 APC2O95996 2303 aa-0.71□□□□□ -2.52
PSMA4-221ENST00000560842 TRAV12-2A0A075B6T6 113 aa-0.71□□□□□ -2.52
PSMA4-221ENST00000560842 E5RI56 91 aa-0.71□□□□□ -2.52
PSMA4-221ENST00000560842 UQCRQO14949 82 aa-0.71□□□□□ -2.52
PSMA4-221ENST00000560842 CKS2P33552 79 aa-0.71□□□□□ -2.52
PSMA4-221ENST00000560842 CDC26Q8NHZ8 85 aa-0.71□□□□□ -2.52
PSMA4-221ENST00000560842 PDZD2O15018 2839 aa-0.72□□□□□ -2.52
PSMA4-221ENST00000560842 VIRMAQ69YN4 1812 aaKnown RBP-0.72□□□□□ -2.52
PSMA4-221ENST00000560842 CXorf51AA0A1B0GTR3 108 aa-0.72□□□□□ -2.52
PSMA4-221ENST00000560842 C9JAW5 83 aa-0.72□□□□□ -2.52
PSMA4-221ENST00000560842 RPL7P18124 248 aaKnown RBP-0.72□□□□□ -2.52
PSMA4-221ENST00000560842 UNQ5815/PRO19632Q6UWF5 114 aa-0.72□□□□□ -2.52
PSMA4-221ENST00000560842 PCBD2Q9H0N5 130 aa-0.72□□□□□ -2.52
PSMA4-221ENST00000560842 PKDREJQ9NTG1 2253 aa-0.72□□□□□ -2.53
PSMA4-221ENST00000560842 ZNF142P52746 1687 aaPredicted RBP-0.72□□□□□ -2.53
PSMA4-221ENST00000560842 ZNF292O60281 2723 aa-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 PNMA8CA0A1B0GUJ8 204 aa-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 M0QZK8 103 aa-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 POLR2JP52435 117 aaKnown RBP-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 BRK1Q8WUW1 75 aa-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 BPESC1Q9GZL8 116 aa-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 COA4Q9NYJ1 87 aa-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 HERC1Q15751 4861 aa-0.73□□□□□ -2.53
PSMA4-221ENST00000560842 PIEZO2Q9H5I5 2752 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 IFNA21P01568 189 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 ELOF1P60002 83 aaKnown RBP-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 PPP1R1CQ8WVI7 109 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 TMEM141Q96I45 108 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 BET1LQ9NYM9 111 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 TRAPPC2LQ9UL33 140 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 NF1P21359 2839 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 MED23Q9ULK4 1368 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 HECTD4Q9Y4D8 3996 aa-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 MAP1AP78559 2803 aaPredicted RBP-0.74□□□□□ -2.53
PSMA4-221ENST00000560842 GVQW2A0A096LPI5 108 aaPredicted RBP-0.75□□□□□ -2.53
PSMA4-221ENST00000560842 F2Z2F3 143 aa-0.75□□□□□ -2.53
PSMA4-221ENST00000560842 SLC25A5P05141 298 aaKnown RBP-0.75□□□□□ -2.53
PSMA4-221ENST00000560842 GNG10P50151 68 aa-0.75□□□□□ -2.53
PSMA4-221ENST00000560842 PPDPFLQ8WWR9 84 aa-0.75□□□□□ -2.53
PSMA4-221ENST00000560842 ARHGAP31Q2M1Z3 1444 aa-0.75□□□□□ -2.53
PSMA4-221ENST00000560842 MAP1BP46821 2468 aaKnown RBP-0.76□□□□□ -2.53
PSMA4-221ENST00000560842 G0S2P27469 103 aa-0.76□□□□□ -2.53
PSMA4-221ENST00000560842 METTL1Q9UBP6 276 aaKnown RBP-0.76□□□□□ -2.53
PSMA4-221ENST00000560842 SMPXQ9UHP9 88 aa-0.76□□□□□ -2.53
PSMA4-221ENST00000560842 SSC5DA1L4H1 1573 aa-0.76□□□□□ -2.53
PSMA4-221ENST00000560842 FAT1Q14517 4588 aa-0.77□□□□□ -2.53
PSMA4-221ENST00000560842 CFDP00746 253 aaPredicted RBP-0.77□□□□□ -2.53
PSMA4-221ENST00000560842 TOMM20LQ6UXN7 152 aa-0.77□□□□□ -2.53
PSMA4-221ENST00000560842 CCDC115Q96NT0 180 aa-0.77□□□□□ -2.53
PSMA4-221ENST00000560842 NDUFAF1Q9Y375 327 aa-0.77□□□□□ -2.53
PSMA4-221ENST00000560842 LRP1BQ9NZR2 4599 aa-0.77□□□□□ -2.53
PSMA4-221ENST00000560842 HELZP42694 1942 aaKnown RBP-0.77□□□□□ -2.53
PSMA4-221ENST00000560842 APOC1P02654 83 aa-0.78□□□□□ -2.53
PSMA4-221ENST00000560842 NMBP08949 121 aa-0.78□□□□□ -2.53
PSMA4-221ENST00000560842 PCBD1P61457 104 aa-0.78□□□□□ -2.53
PSMA4-221ENST00000560842 OR9Q1Q8NGQ5 310 aa-0.78□□□□□ -2.53
PSMA4-221ENST00000560842 BSNQ9UPA5 3926 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 KMT2CQ8NEZ4 4911 aaKnown RBP-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 TRAV2A0A0B4J234 112 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 SPRR2DP22532 72 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 HSD17B12Q53GQ0 312 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 VPS25Q9BRG1 176 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 DOCK11Q5JSL3 2073 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 ALMS1Q8TCU4 4167 aa-0.79□□□□□ -2.54
PSMA4-221ENST00000560842 LAMB1P07942 1786 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 A0A087WTM6 91 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 TCRAP04437 139 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 AKR1D1P51857 326 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 PLGLB1Q02325 96 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 SMIM11BQ8TCY0 68 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 CHD6Q8TD26 2715 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 NBEAL1Q6ZS30 2694 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 PLXNA1Q9UIW2 1896 aa-0.8□□□□□ -2.54
PSMA4-221ENST00000560842 COL6A3P12111 3177 aa-0.81□□□□□ -2.54
PSMA4-221ENST00000560842 KDM5CP41229 1560 aa-0.81□□□□□ -2.54
PSMA4-221ENST00000560842 ZNF670-ZNF695F2Z2N8 137 aa-0.81□□□□□ -2.54
PSMA4-221ENST00000560842 OR2T2Q6IF00 324 aa-0.81□□□□□ -2.54
PSMA4-221ENST00000560842 SLC25A26Q70HW3 274 aa-0.81□□□□□ -2.54
PSMA4-221ENST00000560842 TAS2R8Q9NYW2 309 aa-0.81□□□□□ -2.54
PSMA4-221ENST00000560842 CASZ1Q86V15 1759 aa-0.81□□□□□ -2.54
PSMA4-221ENST00000560842 C2CD3Q4AC94 2353 aa-0.82□□□□□ -2.54
PSMA4-221ENST00000560842 TRAV17A0A0B4J275 112 aa-0.82□□□□□ -2.54
PSMA4-221ENST00000560842 HIST1H1BP16401 226 aaKnown RBP-0.82□□□□□ -2.54
PSMA4-221ENST00000560842 NDUFA11Q86Y39 141 aa-0.82□□□□□ -2.54
PSMA4-221ENST00000560842 CCDC171Q6TFL3 1326 aa-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 SETXQ7Z333 2677 aaKnown RBP-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 PBRM1Q86U86 1689 aa-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 UHRF1BP1LA0JNW5 1464 aa-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 PTPRMP28827 1452 aa-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 KRTAP20-2Q3LI61 65 aa-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 TMEM128Q5BJH2 165 aa-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 PPP1R2P3Q6NXS1 205 aa-0.83□□□□□ -2.54
PSMA4-221ENST00000560842 XIRP1Q702N8 1843 aaKnown RBP-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms