RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 A4D1N5 150 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 ASPHD1Q5U4P2 390 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 ZMAT4Q9H898 229 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 PCNX2A6NKB5 2137 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 K7EIM0 57 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 NDUFS5O43920 106 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 CCL24O00175 119 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 LHBP01229 141 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 CHD3Q12873 2000 aaKnown RBP10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGLV11-55A0A075B6I3 123 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 DEFB112Q30KQ8 113 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 ATP6V0E2Q8NHE4 81 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 SS18L2Q9UHA2 77 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 FAM208BQ5VWN6 2430 aa10.3□□□□□ -0.76
CSPG4P11-201ENST00000560634 PLA2G2CQ5R387 149 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 Q6ZSR3 168 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 MUSTN1Q8IVN3 82 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 RS1O15537 224 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 MP68P56378 58 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 HIST2H2BCQ6DN03 193 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 ICOSQ9Y6W8 199 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 NDUFB1O75438 58 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 ZGRF1Q86YA3 2104 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGHV7-81A0A0B4J1V7 117 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 A0A0J9YY99 117 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 JMJD7-PLA2G4BH0Y9G9 81 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 COX7A2LO14548 114 aa10.29□□□□□ -0.76
CSPG4P11-201ENST00000560634 J3KT08 172 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGHG2P01859 326 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 RPL39LQ96EH5 51 aaKnown RBP10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 CTSGP08311 255 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 EML6Q6ZMW3 1958 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 TNCP24821 2201 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 C16orf54Q6UWD8 224 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 ATP5G1P05496 136 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 MED14OSP0DP75 135 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 DEFB105AQ8NG35 78 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
CSPG4P11-201ENST00000560634 K7EQD1 137 aa10.27□□□□□ -0.76
CSPG4P11-201ENST00000560634 WNK1Q9H4A3 2382 aa10.27□□□□□ -0.77
CSPG4P11-201ENST00000560634 ANK1P16157 1881 aa10.27□□□□□ -0.77
CSPG4P11-201ENST00000560634 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
CSPG4P11-201ENST00000560634 Q6ZQT7 251 aa10.27□□□□□ -0.77
CSPG4P11-201ENST00000560634 NREPQ16612 68 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 COX7B2Q8TF08 81 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 VSIG2Q96IQ7 327 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 SIP14410 1827 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 H3BT86 120 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 MED13Q9UHV7 2174 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 A0A1B0GX51 115 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 J3QKU1 62 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 GYPEP15421 78 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 ZNF503Q96F45 646 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 MSRB1Q9NZV6 116 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 DYSFO75923 2080 aa10.26□□□□□ -0.77
CSPG4P11-201ENST00000560634 E9PLD3 99 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 K7EMT4 169 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 PSMB8P28062 276 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 C9orf66Q5T8R8 295 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 NUPR1O60356 82 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 CXCL5P42830 114 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 CDPF1Q6NVV7 123 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 RNF138Q8WVD3 245 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 PLXNA3P51805 1871 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 FAM167A-AS1Q96KT0 104 aa10.25□□□□□ -0.77
CSPG4P11-201ENST00000560634 C9orf47Q6ZRZ4 202 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 PIFOQ8TCI5 191 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 MRPL36Q9P0J6 103 aaKnown RBP10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 ACACBO00763 2458 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 C5orf47Q569G3 176 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 DKK4Q9UBT3 224 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 FXYD2P54710 66 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 Q9HAA7 133 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 VWA8A3KMH1 1905 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 TRBV6-1A0A0K0K1D8 114 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 KRTAP27-1Q3LI81 207 aa10.24□□□□□ -0.77
CSPG4P11-201ENST00000560634 THSD7BQ9C0I4 1608 aa10.23□□□□□ -0.77
CSPG4P11-201ENST00000560634 CCL18P55774 89 aa10.23□□□□□ -0.77
CSPG4P11-201ENST00000560634 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
CSPG4P11-201ENST00000560634 CTRLP40313 264 aa10.23□□□□□ -0.77
CSPG4P11-201ENST00000560634 WI2-2373I1.2A0A1W2PRP0 233 aa10.23□□□□□ -0.77
CSPG4P11-201ENST00000560634 IGFL2Q6UWQ7 119 aa10.23□□□□□ -0.77
CSPG4P11-201ENST00000560634 TOMM6Q96B49 74 aa10.23□□□□□ -0.77
CSPG4P11-201ENST00000560634 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
CSPG4P11-201ENST00000560634 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
CSPG4P11-201ENST00000560634 NDUFA1O15239 70 aa10.22□□□□□ -0.77
CSPG4P11-201ENST00000560634 PDE6GP18545 87 aa10.22□□□□□ -0.77
CSPG4P11-201ENST00000560634 WFDC2Q14508 124 aa10.22□□□□□ -0.77
CSPG4P11-201ENST00000560634 PIP4P1Q86T03 277 aa10.22□□□□□ -0.77
CSPG4P11-201ENST00000560634 LYPD6Q86Y78 171 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms