RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CD5LO43866 347 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 SMIM17P0DL12 118 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 CDKN1BP46527 198 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 SYNJ2BPP57105 145 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 KRTAP10-9P60411 292 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 ODF1Q14990 250 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 BATFQ16520 125 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 BOD1L2Q8IYS8 172 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 STPG4Q8N801 248 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 C4orf3Q8WVX3 66 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 C9orf85Q96MD7 179 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 TIMM8BQ9Y5J9 83 aaPredicted RBP7.25□□□□□ -1.25
RTF1-206ENST00000560447 TRGV11A0A075B6L2 103 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 TRBV6-5A0A0K0K1A5 114 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 DPM2O94777 84 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 GATA1P15976 413 aaPredicted RBP7.24□□□□□ -1.25
RTF1-206ENST00000560447 HINT1P49773 126 aaPredicted RBP7.24□□□□□ -1.25
RTF1-206ENST00000560447 SEC11AP67812 179 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 SCGB2A2Q13296 93 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 PIK3CD-AS1Q5SR53 167 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 RASL10AQ92737 203 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 TOMM6Q96B49 74 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 TMEM208Q9BTX3 173 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 KIF25-AS1Q9Y6Z4 181 aa7.24□□□□□ -1.25
RTF1-206ENST00000560447 SPG11Q96JI7 2443 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 IGKV3-7A0A075B6H7 116 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 IGHV1OR15-1A0A075B7D0 117 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 TRAV25A0A0B4J276 109 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.23□□□□□ -1.25
RTF1-206ENST00000560447 IGKCP01834 107 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 PRSS1P07477 247 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 ZNF688P0C7X2 276 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 FGF6P10767 208 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 ZNF25P17030 456 aaPredicted RBP7.23□□□□□ -1.25
RTF1-206ENST00000560447 PLNP26678 52 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 BVES-AS1Q5T3Y7 98 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 C10orf99Q6UWK7 81 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 Q6ZQT7 251 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 MAPK1IP1LQ8NDC0 245 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 PTH2Q96A98 100 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 KRTAP4-12Q9BQ66 201 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 EDA2RQ9HAV5 297 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 HIGD1BQ9P298 99 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 ZNF462Q96JM2 2506 aa7.23□□□□□ -1.25
RTF1-206ENST00000560447 A0A087WX48 190 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 IGHV3-16A0A0C4DH30 117 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 J3KRW8 73 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 GNRH2O43555 120 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 GAS8-AS1O95177 125 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 NUDT3O95989 172 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 CD7P09564 240 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 LINC00315P59091 139 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 HSD52Q0P140 79 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 C2orf91Q6ZV80 131 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 WFDC3Q8IUB2 231 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 C14orf178Q8N769 122 aaPredicted RBP7.22□□□□□ -1.25
RTF1-206ENST00000560447 JMJD8Q96S16 334 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 LINC00467Q9BRT7 94 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 COX11Q9Y6N1 276 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 COL12A1Q99715 3063 aa7.22□□□□□ -1.25
RTF1-206ENST00000560447 CSPG4Q6UVK1 2322 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 SRD5A1P18405 259 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 EDN2P20800 178 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 DEFB1P60022 68 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 MPV17L2Q567V2 206 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 AMTNQ6UX39 209 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 FOXC2Q99958 501 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 MCRIP2Q9BUT9 160 aaKnown RBP7.21□□□□□ -1.26
RTF1-206ENST00000560447 DKK2Q9UBU2 259 aa7.21□□□□□ -1.26
RTF1-206ENST00000560447 ZNF256Q9Y2P7 627 aaPredicted RBP7.21□□□□□ -1.26
RTF1-206ENST00000560447 TRAV26-2A0A0B4J265 109 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 F8VRH5 84 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 H7C1H1 209 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 VCYO14598 125 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 MGPP08493 103 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 POLR2KP53803 58 aaKnown RBP7.2□□□□□ -1.26
RTF1-206ENST00000560447 TMEM97Q5BJF2 176 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 PAPPA-AS1Q5QFB9 102 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 ERASQ7Z444 233 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 C18orf15Q96N68 181 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 DUX5Q96PT3 197 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 SPAG8Q99932 426 aaPredicted RBP7.2□□□□□ -1.26
RTF1-206ENST00000560447 HHLA3Q9XRX5 114 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 MUC4Q99102 2169 aa7.2□□□□□ -1.26
RTF1-206ENST00000560447 UTP20O75691 2785 aaKnown RBP7.2□□□□□ -1.26
RTF1-206ENST00000560447 TRBV27A0A0K0K1C4 114 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 A6NDN8 102 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 TFPI2P48307 235 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 CMC4P56277 68 aaPredicted RBP7.19□□□□□ -1.26
RTF1-206ENST00000560447 RIPPLY3P57055 190 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 FXYD7P58549 80 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 RHOHQ15669 191 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 C2orf66Q6UXQ4 117 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 ADAMTSL5Q6ZMM2 481 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 TMEM141Q96I45 108 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms