RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 C9JAW5 83 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 MCRIP1C9JLW8 97 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 TSTD3H0UI37 97 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 H0YJX3 145 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 FXYD1O00168 92 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 DPM2O94777 84 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 MT-ND4LP03901 98 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 PYYP10082 97 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 IL7P13232 177 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 ELOF1P60002 83 aaKnown RBP-0.02□□□□□ -2.41
SPG11-222ENST00000560435 MORN2Q502X0 79 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 OR2T2Q6IF00 324 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 ATP6V0E2Q8NHE4 81 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 VPS25Q9BRG1 176 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 SLC35B3Q9H1N7 401 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 PROK2Q9HC23 129 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 TAS2R8Q9NYW2 309 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 HIGD1AQ9Y241 93 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 TTC28Q96AY4 2481 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 AFDNP55196 1824 aaKnown RBP-0.02□□□□□ -2.41
SPG11-222ENST00000560435 XIRP1Q702N8 1843 aaKnown RBP-0.02□□□□□ -2.41
SPG11-222ENST00000560435 DLEC1Q9Y238 1755 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 ABCA4P78363 2273 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 LRP5O75197 1615 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 IGF2RP11717 2491 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 DMBT1Q9UGM3 2413 aaPredicted RBP-0.03□□□□□ -2.41
SPG11-222ENST00000560435 MYH1P12882 1939 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 RBBP6Q7Z6E9 1792 aaKnown RBP-0.03□□□□□ -2.41
SPG11-222ENST00000560435 TRAV12-2A0A075B6T6 113 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 A0A087WTM6 91 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 CCDC179H3BU77 68 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 M0R2P5 195 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 YPEL1O60688 119 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 SMIM24O75264 130 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 DBIP07108 87 aaKnown RBP-0.03□□□□□ -2.41
SPG11-222ENST00000560435 PAEPP09466 180 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 SCGB1A1P11684 91 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 NEFHP12036 1026 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 SLC25A6P12236 298 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 CMPK1P30085 196 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 POLR2JP52435 117 aaKnown RBP-0.03□□□□□ -2.41
SPG11-222ENST00000560435 PCBD1P61457 104 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 IQCJQ1A5X6 159 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 UNQ5815/PRO19632Q6UWF5 114 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 TCTE3Q8IZS6 198 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 DYNLRB2Q8TF09 96 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 PPP1R1CQ8WVI7 109 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 MAGOHBQ96A72 148 aaKnown RBP-0.03□□□□□ -2.41
SPG11-222ENST00000560435 TMEM141Q96I45 108 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 BET1LQ9NYM9 111 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 RREB1Q92766 1687 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 KDM6BO15054 1643 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 TENM4Q6N022 2769 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 HELZP42694 1942 aaKnown RBP-0.03□□□□□ -2.41
SPG11-222ENST00000560435 ABCA1O95477 2261 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 PTPRMP28827 1452 aa-0.03□□□□□ -2.41
SPG11-222ENST00000560435 CDK12Q9NYV4 1490 aaPredicted RBP-0.03□□□□□ -2.41
SPG11-222ENST00000560435 MAP2P11137 1827 aaKnown RBP-0.03□□□□□ -2.42
SPG11-222ENST00000560435 CACNA1AO00555 2505 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 SOGA1O94964 1423 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 CASZ1Q86V15 1759 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 UBR5O95071 2799 aaPredicted RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 BCORL1Q5H9F3 1711 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 CCDC171Q6TFL3 1326 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 LRP1Q07954 4544 aaKnown RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 TRBV20-1A0A075B6N2 111 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 GVQW2A0A096LPI5 108 aaPredicted RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 PITX3O75364 302 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 APOC1P02654 83 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 RBP4P02753 201 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 TSPAN19P0C672 248 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 CCL3L1P16619 93 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 NPC2P61916 151 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 CCDC153Q494R4 210 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 Q5BKY6 102 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 PYDC1Q8WXC3 89 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 IFI27L1Q96BM0 104 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 Q96NJ1 140 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 DSCR8Q96T75 97 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 BANF2Q9H503 90 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 MRPL40Q9NQ50 206 aaKnown RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 COA4Q9NYJ1 87 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 CALML5Q9NZT1 146 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 ERG28Q9UKR5 140 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 LSM2Q9Y333 95 aaKnown RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 NOP16Q9Y3C1 178 aaKnown RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 PLXNA2O75051 1894 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 CDK13Q14004 1512 aaKnown RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 ZNF292O60281 2723 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 FLNCQ14315 2725 aa-0.04□□□□□ -2.42
SPG11-222ENST00000560435 PTPRZ1P23471 2315 aaPredicted RBP-0.04□□□□□ -2.42
SPG11-222ENST00000560435 MED13LQ71F56 2210 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 ANK2Q01484 3957 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 F8P00451 2351 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 SSC5DA1L4H1 1573 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 TRAV17A0A0B4J275 112 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 RBAKDNA6NC62 111 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 ZNF670-ZNF695F2Z2N8 137 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms