RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 RASL10AQ92737 203 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 SMIM2Q9BVW6 85 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 FZR1Q9UM11 496 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 SIGLEC9Q9Y336 463 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 A0A0J9YX75 114 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 A0A1B0GX51 115 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 ZNF815PA8K554 130 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 H3BT86 120 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 H3BTX0 84 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 CCDC179H3BU77 68 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 K7EIM0 57 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 IGHV3-30P01768 117 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 ACYP1P07311 99 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 IGHV3-30-5P0DP03 117 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 FXYD7P58549 80 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 KLK9Q2XQG4 91 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 HCP5Q6MZN7 132 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 TRPT1Q86TN4 253 aaKnown RBP3.93□□□□□ -1.78
TPM1-222ENST00000560131 SMIM20Q8N5G0 67 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 POM121L12Q8N7R1 296 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 NRGNQ92686 78 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 DNAJC30Q96LL9 226 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 ODF3Q96PU9 254 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 PRADC1Q9BSG0 188 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 HES7Q9BYE0 225 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 ONECUT1Q9UBC0 465 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 KAAG1Q9UBP8 84 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 PRO1854Q9UHT4 67 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 KLK9Q9UKQ9 250 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 LENEPQ9Y5L5 61 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 NAV3Q8IVL0 2385 aa3.93□□□□□ -1.78
TPM1-222ENST00000560131 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
TPM1-222ENST00000560131 TRAV4A0A0B4J268 109 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 C11orf86A6NJI1 115 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 M0R2P5 195 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 M0R3E3 92 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 BRI3O95415 125 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 IGHV1-46P01743 117 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 IGHV3-33P01772 117 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 CFC1P0CG37 223 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 ZNF80P51504 273 aaPredicted RBP3.92□□□□□ -1.78
TPM1-222ENST00000560131 RPS28P62857 69 aaKnown RBP3.92□□□□□ -1.78
TPM1-222ENST00000560131 TNFAIP6P98066 277 aaPredicted RBP3.92□□□□□ -1.78
TPM1-222ENST00000560131 ATXN8Q156A1 80 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 TMEM155Q4W5P6 130 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 SCGB1D4Q6XE38 83 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 ZFP2Q6ZN57 461 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 LRRC75A-AS1Q8N1F1 130 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 FAM216BQ8N7L0 139 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 NUP37Q8NFH4 326 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 PTH2Q96A98 100 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 TIMD4Q96H15 378 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 TMEM141Q96I45 108 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 C2orf48Q96LS8 159 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 CCL13Q99616 98 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 VPREB3Q9UKI3 123 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 DNAJC13O75165 2243 aa3.92□□□□□ -1.78
TPM1-222ENST00000560131 TRAV8-2A0A0B4J237 113 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 TRAV8-4A0A0B4J246 113 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 IGHV7-4-1A0A0J9YVY3 117 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 LGALS9O00182 355 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 DUSP14O95147 198 aaKnown RBP3.91□□□□□ -1.78
TPM1-222ENST00000560131 NDUFA3O95167 84 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 IGLV1-47P01700 117 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 IGHV3-48P01763 117 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 ZNF883P0CG24 379 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 LINC01620Q4KN68 170 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 C5orf47Q569G3 176 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 TMEM170BQ5T4T1 132 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 DUX4L9Q6RFH8 374 aaPredicted RBP3.91□□□□□ -1.78
TPM1-222ENST00000560131 C9orf139Q6ZV77 190 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 C15orf53Q8NAA6 179 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 TMEM263Q8WUH6 116 aaKnown RBP3.91□□□□□ -1.78
TPM1-222ENST00000560131 BAALCQ8WXS3 180 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 SCGB3A1Q96QR1 104 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 LINC01587Q99440 93 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 TIMM17AQ99595 171 aa3.91□□□□□ -1.78
TPM1-222ENST00000560131 KIAA0100Q14667 2235 aaKnown RBP3.9□□□□□ -1.78
TPM1-222ENST00000560131 A0A087WW49 117 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 IGKV2-40A0A087WW87 121 aaPredicted RBP3.9□□□□□ -1.79
TPM1-222ENST00000560131 TMSB15BA0A087X1C1 80 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 IGKV3D-20A0A0C4DH25 116 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 IGHV1-3A0A0C4DH29 117 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 SDHAF1A6NFY7 115 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 H3BMM0 161 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 NDUFB3O43676 98 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 GAS8-AS1O95177 125 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 IGKV2D-40P01614 121 aaPredicted RBP3.9□□□□□ -1.79
TPM1-222ENST00000560131 ORM1P02763 201 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 IGHV1-8P0DP01 117 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 EBI3Q14213 229 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 MEIG1Q5JSS6 88 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 HES3Q5TGS1 186 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 SDIM1Q6ZPB5 146 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 NPBQ8NG41 125 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms