RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 IGKV2-40A0A087WW87 121 aaPredicted RBP14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 IGKV2D-40P01614 121 aaPredicted RBP14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 CD40P25942 277 aa14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 TNFAIP6P98066 277 aaPredicted RBP14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 BEX4Q9NWD9 120 aaPredicted RBP14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 NRACQ8N912 160 aa14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 LINC00527Q9UJ94 153 aa14.73□□□□□ -0.05
SEMA4B-215ENST00000560089 MBD3L4A6NDZ8 208 aaPredicted RBP14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 MBD3L3A6NE82 208 aaPredicted RBP14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 MBD3L5A6NJ08 208 aaPredicted RBP14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 MBD3L2Q8NHZ7 208 aaPredicted RBP14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 SLC25A29Q8N8R3 303 aa14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 Q8TAT8 98 aa14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 IGFBPL1Q8WX77 278 aa14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 SHANK2-AS3Q9BTD1 123 aa14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 IMUPQ9GZP8 106 aa14.72□□□□□ -0.05
SEMA4B-215ENST00000560089 COL12A1Q99715 3063 aa14.71□□□□□ -0.05
SEMA4B-215ENST00000560089 ZNF575Q86XF7 245 aa14.71□□□□□ -0.05
SEMA4B-215ENST00000560089 ABCA1O95477 2261 aa14.71□□□□□ -0.05
SEMA4B-215ENST00000560089 ACACBO00763 2458 aa14.71□□□□□ -0.05
SEMA4B-215ENST00000560089 TRGV3P03979 118 aa14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 ZNF833PQ6ZTB9 187 aa14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 TMEM263Q8WUH6 116 aaKnown RBP14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 TPSG1Q9NRR2 321 aa14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 SPANXCQ9NY87 97 aa14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 ICE1Q9Y2F5 2266 aa14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 ZNF22P17026 224 aaPredicted RBP14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 IL17RELQ6ZVW7 336 aa14.7□□□□□ -0.06
SEMA4B-215ENST00000560089 UCNP55089 124 aa14.69□□□□□ -0.06
SEMA4B-215ENST00000560089 TMEM170BQ5T4T1 132 aa14.69□□□□□ -0.06
SEMA4B-215ENST00000560089 COX8CQ7Z4L0 72 aa14.69□□□□□ -0.06
SEMA4B-215ENST00000560089 TOMM6Q96B49 74 aa14.69□□□□□ -0.06
SEMA4B-215ENST00000560089 H3BRN7 92 aa14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 EIF4EBP3O60516 100 aaPredicted RBP14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 DUX4L9Q6RFH8 374 aaPredicted RBP14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 FAM27E3Q08E93 113 aa14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 ZNF672Q499Z4 452 aaPredicted RBP14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 C22orf34Q6ZV56 151 aa14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 SPANXDQ9BXN6 97 aa14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 ZNF256Q9Y2P7 627 aaPredicted RBP14.68□□□□□ -0.06
SEMA4B-215ENST00000560089 ROS1P08922 2347 aa14.67□□□□□ -0.06
SEMA4B-215ENST00000560089 ORMDL2Q53FV1 153 aa14.67□□□□□ -0.06
SEMA4B-215ENST00000560089 KIR2DL5BQ8NHK3 375 aa14.67□□□□□ -0.06
SEMA4B-215ENST00000560089 DUX5Q96PT3 197 aa14.67□□□□□ -0.06
SEMA4B-215ENST00000560089 A0A0G2JNJ9 132 aa14.67□□□□□ -0.06
SEMA4B-215ENST00000560089 ZNRF2Q8NHG8 242 aa14.67□□□□□ -0.06
SEMA4B-215ENST00000560089 Q9UFV3 132 aa14.67□□□□□ -0.06
SEMA4B-215ENST00000560089 COX7CP15954 63 aa14.66□□□□□ -0.06
SEMA4B-215ENST00000560089 SMIM2Q9BVW6 85 aa14.66□□□□□ -0.06
SEMA4B-215ENST00000560089 H7C423 109 aa14.66□□□□□ -0.06
SEMA4B-215ENST00000560089 ERCC8Q13216 396 aa14.66□□□□□ -0.06
SEMA4B-215ENST00000560089 C4orf26Q17RF5 130 aa14.66□□□□□ -0.06
SEMA4B-215ENST00000560089 FAM201AQ5SY85 155 aa14.66□□□□□ -0.06
SEMA4B-215ENST00000560089 A0A0B4J2C4 111 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 IGLV2-23P01705 113 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 PVRIGQ6DKI7 326 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 MRAPQ8TCY5 172 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 POLEQ07864 2286 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 VMA21Q3ZAQ7 101 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 HRCT1Q6UXD1 115 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 SRSF2Q01130 221 aaKnown RBP14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 METTL26Q96S19 204 aa14.65□□□□□ -0.06
SEMA4B-215ENST00000560089 H3BT86 120 aa14.64□□□□□ -0.07
SEMA4B-215ENST00000560089 ATP5G1P05496 136 aa14.64□□□□□ -0.07
SEMA4B-215ENST00000560089 C11orf86A6NJI1 115 aa14.64□□□□□ -0.07
SEMA4B-215ENST00000560089 TSPEAR-AS2P59090 65 aa14.64□□□□□ -0.07
SEMA4B-215ENST00000560089 C14orf178Q8N769 122 aaPredicted RBP14.64□□□□□ -0.07
SEMA4B-215ENST00000560089 TRIAP1O43715 76 aa14.63□□□□□ -0.07
SEMA4B-215ENST00000560089 CRYGAP11844 174 aa14.63□□□□□ -0.07
SEMA4B-215ENST00000560089 LRBAP50851 2863 aa14.63□□□□□ -0.07
SEMA4B-215ENST00000560089 OVOL1O14753 267 aa14.63□□□□□ -0.07
SEMA4B-215ENST00000560089 PDE6HQ13956 83 aa14.63□□□□□ -0.07
SEMA4B-215ENST00000560089 C2orf66Q6UXQ4 117 aa14.63□□□□□ -0.07
SEMA4B-215ENST00000560089 DSCAMO60469 2012 aa14.62□□□□□ -0.07
SEMA4B-215ENST00000560089 RPL27AP46776 148 aaKnown RBP14.62□□□□□ -0.07
SEMA4B-215ENST00000560089 IGHV1-18A0A0C4DH31 117 aa14.62□□□□□ -0.07
SEMA4B-215ENST00000560089 M0R1B8 84 aa14.62□□□□□ -0.07
SEMA4B-215ENST00000560089 IGKV1-17P01599 117 aa14.62□□□□□ -0.07
SEMA4B-215ENST00000560089 DEFB121Q5J5C9 76 aa14.62□□□□□ -0.07
SEMA4B-215ENST00000560089 hADV29S1A0JD25 119 aa14.61□□□□□ -0.07
SEMA4B-215ENST00000560089 IGKV3-15P01624 115 aa14.61□□□□□ -0.07
SEMA4B-215ENST00000560089 PSMG3-AS1Q96PY0 264 aa14.61□□□□□ -0.07
SEMA4B-215ENST00000560089 TRBV30A0A0K0K1B3 111 aa14.61□□□□□ -0.07
SEMA4B-215ENST00000560089 TRACP01848 142 aa14.61□□□□□ -0.07
SEMA4B-215ENST00000560089 DPH3Q96FX2 82 aa14.61□□□□□ -0.07
SEMA4B-215ENST00000560089 SLC25A15Q9Y619 301 aa14.6□□□□□ -0.07
SEMA4B-215ENST00000560089 CFAP46Q8IYW2 2715 aa14.6□□□□□ -0.07
SEMA4B-215ENST00000560089 TRAV41A0A0B4J266 112 aa14.6□□□□□ -0.07
SEMA4B-215ENST00000560089 RNF125Q96EQ8 232 aa14.6□□□□□ -0.07
SEMA4B-215ENST00000560089 PLCE1Q9P212 2302 aa14.6□□□□□ -0.07
SEMA4B-215ENST00000560089 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 KLRB1Q12918 225 aa14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 MRGPRG-AS1Q2M3A8 158 aa14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 TMEM30BQ3MIR4 351 aa14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 MUSTN1Q8IVN3 82 aa14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 DEFB108BQ8NET1 73 aa14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 ZFYVE26Q68DK2 2539 aa14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 PIMREGQ9BSJ6 248 aa14.59□□□□□ -0.07
SEMA4B-215ENST00000560089 LGALS3P17931 250 aaKnown RBP14.58□□□□□ -0.08
SEMA4B-215ENST00000560089 PAPPA-AS1Q5QFB9 102 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms