RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 F2Z2F3 143 aa13.02□□□□□ -0.33
CLPX-203ENST00000558958 S100PP25815 95 aa13.02□□□□□ -0.33
CLPX-203ENST00000558958 ZNF415Q09FC8 603 aa13.02□□□□□ -0.33
CLPX-203ENST00000558958 KCNIP4Q6PIL6 250 aa13.02□□□□□ -0.33
CLPX-203ENST00000558958 RETNQ9HD89 108 aa13.02□□□□□ -0.33
CLPX-203ENST00000558958 TIMM8BQ9Y5J9 83 aaPredicted RBP13.02□□□□□ -0.33
CLPX-203ENST00000558958 PLAC8L1A1L4L8 177 aa13.01□□□□□ -0.33
CLPX-203ENST00000558958 TM2D3Q9BRN9 247 aa13.01□□□□□ -0.33
CLPX-203ENST00000558958 MIFP14174 115 aa13□□□□□ -0.33
CLPX-203ENST00000558958 IL17DQ8TAD2 202 aa13□□□□□ -0.33
CLPX-203ENST00000558958 CNFNQ9BYD5 112 aa13□□□□□ -0.33
CLPX-203ENST00000558958 MUC21A0A0G2JKD1 596 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 MUC21A0A140T8X8 626 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 Q8NAQ8 132 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 OR10AG1Q8NH19 301 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 B9D2Q9BPU9 175 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 SPATA25Q9BR10 227 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 SPXQ9BT56 116 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 PHLDA3Q9Y5J5 127 aa12.99□□□□□ -0.33
CLPX-203ENST00000558958 TRAV9-1A0A075B6T8 112 aa12.98□□□□□ -0.33
CLPX-203ENST00000558958 IGHV4-28A0A0C4DH34 117 aa12.98□□□□□ -0.33
CLPX-203ENST00000558958 SNURFLB1AK76 121 aa12.98□□□□□ -0.33
CLPX-203ENST00000558958 ELOBQ15370 118 aa12.98□□□□□ -0.33
CLPX-203ENST00000558958 WDR73Q6P4I2 378 aa12.98□□□□□ -0.33
CLPX-203ENST00000558958 BTF3L4Q96K17 158 aa12.98□□□□□ -0.33
CLPX-203ENST00000558958 YPEL4Q96NS1 127 aa12.98□□□□□ -0.33
CLPX-203ENST00000558958 A0A1B0GUT8 65 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 SPINK4O60575 86 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 DAZ2Q13117 558 aaKnown RBP12.97□□□□□ -0.33
CLPX-203ENST00000558958 MUC4Q99102 2169 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 IGHV4-4A0A075B6R2 117 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 NXPH4O95158 308 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 SSTP61278 116 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 CACNG7P62955 275 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 SPANXN1Q5VSR9 72 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 PTH2Q96A98 100 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
CLPX-203ENST00000558958 DNAH9Q9NYC9 4486 aa12.96□□□□□ -0.33
CLPX-203ENST00000558958 M0R2P5 195 aa12.96□□□□□ -0.34
CLPX-203ENST00000558958 NTF3P20783 257 aa12.96□□□□□ -0.34
CLPX-203ENST00000558958 EMP1P54849 157 aa12.96□□□□□ -0.34
CLPX-203ENST00000558958 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.34
CLPX-203ENST00000558958 MRPL54Q6P161 138 aaKnown RBP12.96□□□□□ -0.34
CLPX-203ENST00000558958 ZFP82Q8N141 532 aa12.96□□□□□ -0.34
CLPX-203ENST00000558958 NOP10Q9NPE3 64 aaKnown RBP12.96□□□□□ -0.34
CLPX-203ENST00000558958 PRKDCP78527 4128 aaKnown RBP12.95□□□□□ -0.34
CLPX-203ENST00000558958 TRBV24-1A0A075B6N3 115 aa12.95□□□□□ -0.34
CLPX-203ENST00000558958 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
CLPX-203ENST00000558958 M0R381 172 aa12.95□□□□□ -0.34
CLPX-203ENST00000558958 RIGQ13278 110 aa12.95□□□□□ -0.34
CLPX-203ENST00000558958 ATP5L2Q7Z4Y8 100 aa12.95□□□□□ -0.34
CLPX-203ENST00000558958 MSRB1Q9NZV6 116 aa12.95□□□□□ -0.34
CLPX-203ENST00000558958 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
CLPX-203ENST00000558958 TENM3Q9P273 2699 aa12.95□□□□□ -0.34
CLPX-203ENST00000558958 A0A1B0GXF2 115 aa12.94□□□□□ -0.34
CLPX-203ENST00000558958 DEFB4AO15263 64 aa12.94□□□□□ -0.34
CLPX-203ENST00000558958 TWIST1Q15672 202 aa12.94□□□□□ -0.34
CLPX-203ENST00000558958 ZNF876PQ49A33 203 aa12.94□□□□□ -0.34
CLPX-203ENST00000558958 SYT8Q8NBV8 401 aa12.94□□□□□ -0.34
CLPX-203ENST00000558958 RASL10AQ92737 203 aa12.94□□□□□ -0.34
CLPX-203ENST00000558958 ZMAT4Q9H898 229 aa12.94□□□□□ -0.34
CLPX-203ENST00000558958 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
CLPX-203ENST00000558958 PIK3CD-AS1Q5SR53 167 aa12.93□□□□□ -0.34
CLPX-203ENST00000558958 MRPL16Q9NX20 251 aaKnown RBP12.93□□□□□ -0.34
CLPX-203ENST00000558958 TRGV1A0A0A0MS02 117 aa12.92□□□□□ -0.34
CLPX-203ENST00000558958 A0A1B0GW15 77 aa12.92□□□□□ -0.34
CLPX-203ENST00000558958 HBBP68871 147 aa12.92□□□□□ -0.34
CLPX-203ENST00000558958 Q6ZTI0 123 aa12.92□□□□□ -0.34
CLPX-203ENST00000558958 COLCA2A8K830 154 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 NDUFAF3Q9BU61 184 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 C11orf68Q9H3H3 251 aaKnown RBP12.91□□□□□ -0.34
CLPX-203ENST00000558958 LYRM9A8MSI8 78 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 CAMPP49913 170 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 FAM222AQ5U5X8 452 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 RASL11AQ6T310 242 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 FAM210BQ96KR6 192 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 DKK2Q9UBU2 259 aa12.91□□□□□ -0.34
CLPX-203ENST00000558958 LINC00612Q8N6U2 182 aa12.9□□□□□ -0.34
CLPX-203ENST00000558958 JPT2Q9H910 190 aa12.9□□□□□ -0.34
CLPX-203ENST00000558958 COL7A1Q02388 2944 aa12.89□□□□□ -0.35
CLPX-203ENST00000558958 S100A8P05109 93 aa12.89□□□□□ -0.35
CLPX-203ENST00000558958 TRGC1P0CF51 173 aa12.89□□□□□ -0.35
CLPX-203ENST00000558958 NHLRC4P0CG21 123 aaPredicted RBP12.89□□□□□ -0.35
CLPX-203ENST00000558958 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
CLPX-203ENST00000558958 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 GAGE7O76087 117 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 EVI2AP22794 236 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 CELA1Q9UNI1 258 aa12.88□□□□□ -0.35
CLPX-203ENST00000558958 A0A0J9YWU9 116 aa12.87□□□□□ -0.35
CLPX-203ENST00000558958 A8MWV9 139 aa12.87□□□□□ -0.35
CLPX-203ENST00000558958 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
CLPX-203ENST00000558958 SMIM15Q7Z3B0 74 aa12.87□□□□□ -0.35
CLPX-203ENST00000558958 C14orf178Q8N769 122 aaPredicted RBP12.87□□□□□ -0.35
CLPX-203ENST00000558958 TMEM191AQ9H0A3 160 aa12.87□□□□□ -0.35
CLPX-203ENST00000558958 RS1O15537 224 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 CRYGDP07320 174 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms