RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 RABL2AQ9UBK7 228 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-207ENST00000558500 LENEPQ9Y5L5 61 aa4.28□□□□□ -1.72
LRRC28-207ENST00000558500 URGCP-MRPS24S4R325 110 aa4.28□□□□□ -1.72
LRRC28-207ENST00000558500 C7orf66A4D0T2 115 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 H0YIZ8 118 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 NPSP0C0P6 89 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 NBEAP1P0C6P0 100 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 RPL19P84098 196 aaKnown RBP4.27□□□□□ -1.73
LRRC28-207ENST00000558500 ELOBQ15370 118 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 WDR73Q6P4I2 378 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 DIRAS2Q96HU8 199 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 CHCHD7Q9BUK0 85 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 SLC25A2Q9BXI2 301 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 SDF2L1Q9HCN8 221 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 WDR83OSQ9Y284 106 aa4.27□□□□□ -1.73
LRRC28-207ENST00000558500 A0A087WX48 190 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 TRAV21A0A0B4J279 112 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 A0A0U1RQV1 116 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 PHOX2AO14813 284 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 PAGE4O60829 102 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 FAUP35544 74 aaKnown RBP4.26□□□□□ -1.73
LRRC28-207ENST00000558500 CSN1S1P47710 185 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 BLOC1S1P78537 153 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 Q0VG73 95 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 CTF1Q16619 201 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 GCSAMLQ5JQS6 135 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 MCFD2Q8NI22 146 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 PHYHIPLQ96FC7 376 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 KCNS1Q96KK3 526 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 SLC25A21Q9BQT8 299 aaPredicted RBP4.26□□□□□ -1.73
LRRC28-207ENST00000558500 NAA50Q9GZZ1 169 aaKnown RBP4.26□□□□□ -1.73
LRRC28-207ENST00000558500 C20orf85Q9H1P6 137 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 UQCC1Q9NVA1 299 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 Q9UF83 564 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 RSL24D1Q9UHA3 163 aaKnown RBP4.26□□□□□ -1.73
LRRC28-207ENST00000558500 KIF25-AS1Q9Y6Z4 181 aa4.26□□□□□ -1.73
LRRC28-207ENST00000558500 A0A087WYN8 130 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 C9orf170A2RU37 121 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 IAH1Q2TAA2 248 aaPredicted RBP4.25□□□□□ -1.73
LRRC28-207ENST00000558500 ZNF506Q5JVG8 444 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 ENHOQ6UWT2 76 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 C7orf33Q8WU49 177 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 TMED6Q8WW62 240 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 ASB13Q8WXK3 278 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 PTH2Q96A98 100 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 FXYD5Q96DB9 178 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 RNF185Q96GF1 192 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 SAMD10Q9BYL1 202 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
LRRC28-207ENST00000558500 PGPA6NDG6 321 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 CST7O76096 145 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 HLA-DQA1P01909 254 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 FGF8P55075 233 aaPredicted RBP4.24□□□□□ -1.73
LRRC28-207ENST00000558500 RANP62826 216 aaKnown RBP4.24□□□□□ -1.73
LRRC28-207ENST00000558500 PRR3P79522 188 aaKnown RBP4.24□□□□□ -1.73
LRRC28-207ENST00000558500 BAXQ07812 192 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 KCNIP4Q6PIL6 250 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 ZFP2Q6ZN57 461 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 Q6ZNX1 250 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 MIR17HGQ75NE6 70 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 OR2T35Q8NGX2 323 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 LINC00479Q96M42 142 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 C9orf85Q96MD7 179 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 PARLQ9H300 379 aa4.24□□□□□ -1.73
LRRC28-207ENST00000558500 UBE2L5PA0A1B0GUS4 154 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 F6UZH7 168 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 L7N2F9 121 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 ATP6V1G2O95670 118 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 CRPP02741 224 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 CHTF8P0CG12 524 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 AP3S2P59780 193 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
LRRC28-207ENST00000558500 SPINK6Q6UWN8 80 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 TOMM5Q8N4H5 51 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 C14orf178Q8N769 122 aaPredicted RBP4.23□□□□□ -1.73
LRRC28-207ENST00000558500 SPACA4Q8TDM5 124 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 TVP23CQ96ET8 276 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 PLAC8Q9NZF1 115 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 GSKIPQ9P0R6 139 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
LRRC28-207ENST00000558500 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 A8MWV9 139 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 RNASE3P12724 160 aaKnown RBP4.22□□□□□ -1.73
LRRC28-207ENST00000558500 FGF7P21781 194 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 S100A11P31949 105 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 BCAP31P51572 246 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 SPCS2Q15005 226 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 UFSP1Q6NVU6 142 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 OR10G7Q8NGN6 311 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 GTSF1Q8WW33 167 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 TREM1Q9NP99 234 aa4.22□□□□□ -1.73
LRRC28-207ENST00000558500 IGHV3-64A0A075B6Q5 118 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 TMEM262E9PQX1 116 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 OR7C2O60412 319 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 SULT1A1P50225 295 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 MIAQ16674 131 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 SPANXN2Q5MJ10 180 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms