RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 C17orf77Q96MU5 243 aa9.21□□□□□ -0.93
CSPG4P12-201ENST00000558282 TTC28Q96AY4 2481 aa9.21□□□□□ -0.94
CSPG4P12-201ENST00000558282 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.94
CSPG4P12-201ENST00000558282 LYPD2Q6UXB3 125 aa9.21□□□□□ -0.94
CSPG4P12-201ENST00000558282 WDR81Q562E7 1941 aa9.21□□□□□ -0.94
CSPG4P12-201ENST00000558282 M0QXV9 152 aa9.21□□□□□ -0.94
CSPG4P12-201ENST00000558282 COX7CP15954 63 aa9.21□□□□□ -0.94
CSPG4P12-201ENST00000558282 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
CSPG4P12-201ENST00000558282 IGHV3-38A0A0C4DH36 116 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 MBD3L4A6NDZ8 208 aaPredicted RBP9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 MBD3L3A6NE82 208 aaPredicted RBP9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 MBD3L5A6NJ08 208 aaPredicted RBP9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 MBD3L2Q8NHZ7 208 aaPredicted RBP9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 PHF3Q92576 2039 aaKnown RBP9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 A0A0U1RQV1 116 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 TEX49A0A1B0GTD5 131 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 SMIM9A6NGZ8 99 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 COX7A2LO14548 114 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 PATE2Q6UY27 113 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 RPL39LQ96EH5 51 aaKnown RBP9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 UBE2E2Q96LR5 201 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 LECT2O14960 151 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 BUB3O43684 328 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 ZNRD1Q9P1U0 126 aa9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 TNRC6AQ8NDV7 1962 aaKnown RBP9.2□□□□□ -0.94
CSPG4P12-201ENST00000558282 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 MSRB1Q9NZV6 116 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 FER1L5A0AVI2 2057 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 HEATR5AQ86XA9 2040 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 CCDC179H3BU77 68 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 H3BUX3 64 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 UPK3BQ9BT76 320 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 A0A1W2PRX2 142 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 FOXE3Q13461 319 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 ACACAQ13085 2346 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 MIAQ16674 131 aa9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 RNASE13Q5GAN3 156 aaKnown RBP9.19□□□□□ -0.94
CSPG4P12-201ENST00000558282 UBE2E1P51965 193 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 PRR30Q53SZ7 412 aaPredicted RBP9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 MDS2Q8NDY4 140 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 TRAV23DV6A0A075B6W5 121 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 RNF152Q8N8N0 203 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 PCNX1Q96RV3 2341 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 DSCR9P59020 149 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
CSPG4P12-201ENST00000558282 TP53TG3Q9ULZ0 132 aa9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 MGAMO43451 1857 aa9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 TRBV30A0A0K0K1B3 111 aa9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 GNRH2O43555 120 aa9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 XGP55808 180 aa9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 IGHV7-4-1A0A0J9YVY3 117 aa9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 RPL18AQ02543 176 aaKnown RBP9.17□□□□□ -0.94
CSPG4P12-201ENST00000558282 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 LOXP28300 417 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 CENPVL3A0A0U1RRI6 287 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 LINC01619G3V211 115 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 WISP1O95388 367 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 SAA4P35542 130 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 LYRM9A8MSI8 78 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 H3BUA1 57 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 MPLKIPQ8TAP9 179 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 TSC2P49815 1807 aa9.16□□□□□ -0.94
CSPG4P12-201ENST00000558282 SMIM26A0A096LP01 95 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 ARTNQ5T4W7 220 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 HIST2H2BCQ6DN03 193 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 HIST2H2BDQ6DRA6 164 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 C10orf105Q8TEF2 133 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 DEFB130BP0DP73 79 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 DEFB130AP0DP74 79 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 MBD6Q96DN6 1003 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 C14orf132Q9NPU4 83 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 IGLV2-8P01709 118 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 Q0VFX4 171 aa9.15□□□□□ -0.94
CSPG4P12-201ENST00000558282 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.95
CSPG4P12-201ENST00000558282 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.95
CSPG4P12-201ENST00000558282 XCL2Q9UBD3 114 aa9.15□□□□□ -0.95
CSPG4P12-201ENST00000558282 DAZ2Q13117 558 aaKnown RBP9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 I3L2K1 104 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 C2orf91Q6ZV80 131 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 PROP1O75360 226 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 IGKV1-17P01599 117 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 TP73-AS1Q9UF72 201 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 IGHV3-30-3P0DP02 117 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 RPL35AP18077 110 aaKnown RBP9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 KAAG1Q9UBP8 84 aa9.14□□□□□ -0.95
CSPG4P12-201ENST00000558282 UFSP1Q6NVU6 142 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 NDUFB1O75438 58 aa9.13□□□□□ -0.95
CSPG4P12-201ENST00000558282 GDF5OSQ5U4N7 250 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms