RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 SMIM24O75264 130 aa3.3□□□□□ -1.88
ZEB1-210ENST00000557827 SAA1P0DJI8 122 aaPredicted RBP3.3□□□□□ -1.88
ZEB1-210ENST00000557827 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
ZEB1-210ENST00000557827 GGACTQ9BVM4 153 aa3.3□□□□□ -1.88
ZEB1-210ENST00000557827 FAM208AQ9UK61 1670 aaKnown RBP3.3□□□□□ -1.88
ZEB1-210ENST00000557827 MRC1P22897 1456 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 TCRBV4S1A1TA0A5B7 111 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 LINC00694P0DN24 101 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 BRS3P32247 399 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 AKR1D1P51857 326 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 LSM3P62310 102 aaKnown RBP3.29□□□□□ -1.88
ZEB1-210ENST00000557827 RPS25P62851 125 aaKnown RBP3.29□□□□□ -1.88
ZEB1-210ENST00000557827 ARPINQ7Z6K5 226 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 CLECL1Q8IZS7 167 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 MMGT1Q8N4V1 131 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 DEFB123Q8N688 67 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 RGPD3A6NKT7 1758 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-210ENST00000557827 KDM3BQ7LBC6 1761 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 RGPD4Q7Z3J3 1758 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 TNRC6CQ9HCJ0 1690 aaKnown RBP3.29□□□□□ -1.88
ZEB1-210ENST00000557827 DNAH14Q0VDD8 3507 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 NAV3Q8IVL0 2385 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 CEP192Q8TEP8 1941 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
ZEB1-210ENST00000557827 RGPD2P0DJD1 1756 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 A0A087WSZ3 146 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 TRAV27A0A087WT01 109 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 TRAV14DV4A0A0A6YYC5 116 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 LOC107986453A0A1B0GWG9 222 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 K7ERU9 68 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 SLC25A4P12235 298 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 SNRPD3P62318 126 aaKnown RBP3.28□□□□□ -1.88
ZEB1-210ENST00000557827 SPCS2Q15005 226 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
ZEB1-210ENST00000557827 CTAGE3PQ8IX95 158 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 OR4C6Q8NH72 309 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 TP53RKQ96S44 253 aa3.28□□□□□ -1.88
ZEB1-210ENST00000557827 BAZ2BQ9UIF8 2168 aaKnown RBP3.28□□□□□ -1.88
ZEB1-210ENST00000557827 RP1L1Q8IWN7 2480 aaPredicted RBP3.28□□□□□ -1.88
ZEB1-210ENST00000557827 MYH6P13533 1939 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 FREM1Q5H8C1 2179 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 TRAV10A0A0B4J240 114 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 A0A1B0GV90 55 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 C5orf67F2Z3F1 127 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 J3QRE1 110 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 TRACP01848 142 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 CCL4P13236 92 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 HLA-DRB4P13762 266 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 BLCAPP62952 87 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 CIRBPQ14011 172 aaKnown RBP3.27□□□□□ -1.89
ZEB1-210ENST00000557827 TMEM91Q6ZNR0 172 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 C1orf54Q8WWF1 131 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 CHCHD2Q9Y6H1 151 aaPredicted RBP3.27□□□□□ -1.89
ZEB1-210ENST00000557827 HLA-DRB4X5D2U9 266 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 C2CD3Q4AC94 2353 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 SIPA1L3O60292 1781 aaPredicted RBP3.27□□□□□ -1.89
ZEB1-210ENST00000557827 LAMB2P55268 1798 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 SCN11AQ9UI33 1791 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 PKD1L3Q7Z443 1732 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 CRYBG1Q9Y4K1 1723 aa3.27□□□□□ -1.89
ZEB1-210ENST00000557827 RGPD5Q99666 1765 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 ERC2-IT1O76042 136 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 CD2P06729 351 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 OR5AK2Q8NH90 309 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 NABP2Q9BQ15 211 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 COMMD3Q9UBI1 195 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 CEP250Q9BV73 2442 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 PARP4Q9UKK3 1724 aaKnown RBP3.26□□□□□ -1.89
ZEB1-210ENST00000557827 DOCK10Q96BY6 2186 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 MYH13Q9UKX3 1938 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 COL4A4P53420 1690 aaPredicted RBP3.26□□□□□ -1.89
ZEB1-210ENST00000557827 UBR5O95071 2799 aaPredicted RBP3.26□□□□□ -1.89
ZEB1-210ENST00000557827 PTPRZ1P23471 2315 aaPredicted RBP3.26□□□□□ -1.89
ZEB1-210ENST00000557827 GBF1Q92538 1859 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 CDH23Q9H251 3354 aa3.26□□□□□ -1.89
ZEB1-210ENST00000557827 COL14A1Q05707 1796 aaKnown RBP3.25□□□□□ -1.89
ZEB1-210ENST00000557827 SETD2Q9BYW2 2564 aaPredicted RBP3.25□□□□□ -1.89
ZEB1-210ENST00000557827 MYH7P12883 1935 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 SMG1Q96Q15 3661 aaKnown RBP3.25□□□□□ -1.89
ZEB1-210ENST00000557827 TPST1O60507 370 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 NCR2O95944 276 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 GPX1P07203 203 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 HIST1H1BP16401 226 aaKnown RBP3.25□□□□□ -1.89
ZEB1-210ENST00000557827 RRAS2P62070 204 aaPredicted RBP3.25□□□□□ -1.89
ZEB1-210ENST00000557827 C1orf137Q5JT78 98 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 C2orf82Q6UX34 121 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 PSMF1Q92530 271 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 SOX21Q9Y651 276 aaPredicted RBP3.25□□□□□ -1.89
ZEB1-210ENST00000557827 ABCA2Q9BZC7 2435 aa3.25□□□□□ -1.89
ZEB1-210ENST00000557827 CNOT1A5YKK6 2376 aaKnown RBP3.25□□□□□ -1.89
ZEB1-210ENST00000557827 SPTAN1Q13813 2472 aaKnown RBP3.24□□□□□ -1.89
ZEB1-210ENST00000557827 FAM236AA0A1B0GUQ0 79 aa3.24□□□□□ -1.89
ZEB1-210ENST00000557827 FAM236BA0A1B0GV22 79 aa3.24□□□□□ -1.89
ZEB1-210ENST00000557827 C9orf170A2RU37 121 aa3.24□□□□□ -1.89
ZEB1-210ENST00000557827 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
ZEB1-210ENST00000557827 ZNF833PQ6ZTB9 187 aa3.24□□□□□ -1.89
ZEB1-210ENST00000557827 TEN1Q86WV5 123 aa3.24□□□□□ -1.89
ZEB1-210ENST00000557827 COA5Q86WW8 74 aa3.24□□□□□ -1.89
ZEB1-210ENST00000557827 Q8TAT8 98 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms