RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 MRPS24Q96EL2 167 aaKnown RBP1.71□□□□□ -2.14
TRAV28-201ENST00000557548 LINC00526Q96FQ7 95 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 AQP10Q96PS8 301 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 PKMYT1Q99640 499 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 HIGD2AQ9BW72 106 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 DPY30Q9C005 99 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 AGPAT4-IT1Q9H0P7 198 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 PRO0461Q9UI25 63 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 LSM2Q9Y333 95 aaKnown RBP1.71□□□□□ -2.14
TRAV28-201ENST00000557548 SERP1Q9Y6X1 66 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 HSPE1-MOB4S4R3N1 261 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 C10orf71Q711Q0 1435 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 IGHV3-15A0A0B4J1V0 119 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 A0A1W2PQD3 144 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 TMEM235A6NFC5 223 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 MCRIP1C9JLW8 97 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 TMEM262E9PQX1 116 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 M0R2P5 195 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 OR1I1O60431 355 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 TRACP01848 142 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 CD3DP04234 171 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 CRYGAP11844 174 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 RPL28P46779 137 aaKnown RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 SUPT4H1P63272 117 aaKnown RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 CIRBPQ14011 172 aaKnown RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 PYY3Q5JQD4 70 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 Q6AWC8 147 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 EDC4Q6P2E9 1401 aaKnown RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 DYNAPQ8N1N2 210 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 OR4X2Q8NGF9 303 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 OTOSQ8NHW6 89 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 CHCHD1Q96BP2 118 aaKnown RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 IMMP2LQ96T52 175 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 VAMP8Q9BV40 100 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 BCL2L10Q9HD36 194 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 RPL26L1Q9UNX3 145 aaKnown RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 TPRKBQ9Y3C4 175 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 TIMM9Q9Y5J7 89 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 MCM3APO60318 1980 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 COL11A1P12107 1806 aaPredicted RBP1.7□□□□□ -2.14
TRAV28-201ENST00000557548 ZNF236Q9UL36 1845 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 GPR179Q6PRD1 2367 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 MYH1P12882 1939 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 PTPRSQ13332 1948 aa1.7□□□□□ -2.14
TRAV28-201ENST00000557548 BRCA2P51587 3418 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 PLXNA1Q9UIW2 1896 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 DOCK2Q92608 1830 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 TRGV5A0A0B4J1U4 118 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 SMIM31A0A1B0GVY4 71 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 A0A1W2PRS3 328 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 FAM24AA6NFZ4 105 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 ZNF736B4DX44 427 aaPredicted RBP1.69□□□□□ -2.14
TRAV28-201ENST00000557548 H3BPC8 53 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 PSCAO43653 123 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 GZMBP10144 247 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 SLC25A4P12235 298 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 CCL4P13236 92 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 CKS2P33552 79 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 ETV6P41212 452 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 NPC2P61916 151 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 BLCAPP62952 87 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 SS18Q15532 418 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 IGFBP7Q16270 282 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 ASB16-AS1Q495Z4 193 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 SLC35E3Q7Z769 313 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 C3orf56Q8N813 242 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 OR5AK2Q8NH90 309 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 CLEC2BQ92478 149 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 AQP3Q92482 292 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 PSMF1Q92530 271 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 RETNLBQ9BQ08 111 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 PRO1933Q9H354 126 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 TMEM106BQ9NUM4 274 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 MINOS1-NBL1R4GNA1 71 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 CENPFP49454 3210 aa1.69□□□□□ -2.14
TRAV28-201ENST00000557548 KIAA0100Q14667 2235 aaKnown RBP1.68□□□□□ -2.14
TRAV28-201ENST00000557548 LTBP2Q14767 1821 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 IGLV3-9A0A075B6K5 115 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 TRAV7A0A075B6U4 112 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 TRBV10-2A0A0K0K1G8 114 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 A0A1W2PNN7 141 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 C17orf112F2Z3M2 114 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 G3V3Q6 166 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 EDF1O60869 148 aaKnown RBP1.68□□□□□ -2.14
TRAV28-201ENST00000557548 IGLV3-19P01714 112 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 GYPBP06028 91 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 COL8A2P25067 703 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 PEBP1P30086 187 aaKnown RBP1.68□□□□□ -2.14
TRAV28-201ENST00000557548 FXYD2P54710 66 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 C12orf73Q69YU5 71 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 OR2T2Q6IF00 324 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 LYZL1Q6UWQ5 148 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 IGFL3Q6UXB1 125 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 LINC00471Q8N535 108 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 CCL4L1Q8NHW4 92 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 POP5Q969H6 163 aaKnown RBP1.68□□□□□ -2.14
TRAV28-201ENST00000557548 LY96Q9Y6Y9 160 aa1.68□□□□□ -2.14
TRAV28-201ENST00000557548 NYNRINQ9P2P1 1898 aaKnown RBP1.68□□□□□ -2.14
TRAV28-201ENST00000557548 PRR14LQ5THK1 2151 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms