RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CD99P14209 185 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 ADCYAP1P18509 176 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 CD24P25063 80 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 GCHFRP30047 84 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 MYCNOSP40205 109 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 SEC61GP60059 68 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 SLC35B1P78383 322 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 RHOGP84095 191 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 PRB3Q04118 309 aaPredicted RBP1.98□□□□□ -2.09
VRK1-207ENST00000557352 RHEBQ15382 184 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 GUCA2BQ16661 112 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 KRTAP13-2Q52LG2 175 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 SOHLH1Q5JUK2 328 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 FAM78BQ5VT40 261 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 SAMD13Q5VXD3 122 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 C10orf113Q5VZT2 155 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 UNQ5815/PRO19632Q6UWF5 114 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 PATE2Q6UY27 113 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 SSX7Q7RTT5 188 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 CYB561D1Q8N8Q1 229 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 ACY3Q96HD9 319 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 UBE2E2Q96LR5 201 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 LINC00052Q96N35 136 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 SHANK2-AS3Q9BTD1 123 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 C16orf95Q9H693 158 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 TUBA4BQ9H853 241 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 ZNF355PQ9NSJ1 428 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 TMEM242Q9NWH2 141 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 MRPL36Q9P0J6 103 aaKnown RBP1.98□□□□□ -2.09
VRK1-207ENST00000557352 HIGD1AQ9Y241 93 aa1.98□□□□□ -2.09
VRK1-207ENST00000557352 ANK3Q12955 4377 aaKnown RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 RBAKDNA6NC62 111 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 COLCA2A8K830 154 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 C9JQL5 133 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 F8W036 122 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 G3V318 75 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 K7EMT4 169 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 LGALS9O00182 355 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 TGOLN2O43493 480 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 OR2J3O76001 311 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 IL4P05112 153 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 IGLC2P0DOY2 106 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 HIST1H1EP10412 219 aaKnown RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 RPL7P18124 248 aaKnown RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 CRYBB3P26998 211 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 BMI1P35226 326 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 FGF8P55075 233 aaPredicted RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 TAS2R60P59551 318 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 BLCAPP62952 87 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 UBE2L3P68036 154 aaKnown RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 CCL20P78556 96 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 ZNF90Q03938 601 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 ATP5G2Q06055 141 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 REG3AQ06141 175 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 C6orf226Q5I0X4 101 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 GCSAMLQ5JQS6 135 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 LCN15Q6UWW0 184 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 MIR17HGQ75NE6 70 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 LINC00305Q7Z4B0 112 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 BPIFA4PQ86YQ2 179 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 GPHB5Q86YW7 130 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 Q8N976 141 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 C5orf17Q8NAS9 161 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 Q8WTZ3 238 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 HIST1H2BAQ96A08 127 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 FXYD5Q96DB9 178 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 NARS2Q96I59 477 aaKnown RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 BTF3L4Q96K17 158 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 IMMP2LQ96T52 175 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 RARRES2Q99969 163 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 SLC50A1Q9BRV3 221 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 FAM103A1Q9BTL3 118 aaKnown RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 SLC25A2Q9BXI2 301 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 EIF5A2Q9GZV4 153 aaKnown RBP1.97□□□□□ -2.09
VRK1-207ENST00000557352 OR51M1Q9H341 326 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 TREM1Q9NP99 234 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 GNG13Q9P2W3 67 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 NAT8Q9UHE5 227 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 KLF12Q9Y4X4 402 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 RFNGQ9Y644 331 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 MUC4Q99102 2169 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 TENM1Q9UKZ4 2725 aa1.97□□□□□ -2.09
VRK1-207ENST00000557352 STAB1Q9NY15 2570 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TRBV19A0A075B6N1 114 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TRAV9-1A0A075B6T8 112 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TRAV2A0A0B4J234 112 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 MDFIC2A0A1B0GVS7 189 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 CLPSL1A2RUU4 121 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 OR2T8A6NH00 312 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 ZNF98A6NK75 572 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 ZNF727A8MUV8 499 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 GGTLC3B5MD39 225 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 H3BQ15 152 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 PPP1R2P9O14990 202 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 OR7C2O60412 319 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 GGCTO75223 188 aaKnown RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 EIF3GO75821 320 aaKnown RBP eCLIP1.96□□□□□ -2.1
VRK1-207ENST00000557352 APOC3P02656 99 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TRGV3P03979 118 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 SLC25A5P05141 298 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms