RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 SMAD5-AS1Q9Y6J3 95 aa2.18□□□□□ -2.06
SLIRP-208ENST00000556956 TRIOBPQ9H2D6 2365 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 SZT2Q5T011 3432 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 F5P12259 2224 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 RANBP2P49792 3224 aaKnown RBP2.17□□□□□ -2.06
SLIRP-208ENST00000556956 TRAV2A0A0B4J234 112 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 TRAV21A0A0B4J279 112 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 A0A0B4J2C4 111 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV7-4-1A0A0J9YVY3 117 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 A0A0J9YY99 117 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 TRBV10-2A0A0K0K1G8 114 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 A0A1W2PNU3 283 aaPredicted RBP2.17□□□□□ -2.06
SLIRP-208ENST00000556956 C11orf86A6NJI1 115 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 OOSP1A8MZH6 123 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 C9JAW5 83 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 VCYO14598 125 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 LEPROTO15243 131 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV3-30P01768 117 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 TRGV3P03979 118 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 CD7P09564 240 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 CFC1BP0CG36 223 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 CFC1P0CG37 223 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV3-30-5P0DP03 117 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 PLA2G2AP14555 144 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 COX6B1P14854 86 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 LGALS3P17931 250 aaKnown RBP2.17□□□□□ -2.06
SLIRP-208ENST00000556956 PRTN3P24158 256 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 COX7A1P24310 79 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 S100A4P26447 101 aaKnown RBP2.17□□□□□ -2.06
SLIRP-208ENST00000556956 RPL13AP40429 203 aaKnown RBP2.17□□□□□ -2.06
SLIRP-208ENST00000556956 EFNA4P52798 201 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 DLX1P56177 255 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 PMVKQ15126 192 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 ADIPOQQ15848 244 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 ATP1A1-AS1Q5TC04 95 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 C2orf66Q6UXQ4 117 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 Q6ZSV7 163 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 DYNAPQ8N1N2 210 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 SLC25A29Q8N8R3 303 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 PRSS33Q8NF86 280 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 FDCSPQ8NFU4 85 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 Q8TAT8 98 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 PTH2Q96A98 100 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 PLEKHB2Q96CS7 222 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 LINC00477Q96M19 166 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 AGPAT4-IT1Q9H0P7 198 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 DYNLRB1Q9NP97 96 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 DPM3Q9P2X0 92 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 LENEPQ9Y5L5 61 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 CACNA1EQ15878 2313 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 KIAA2026Q5HYC2 2103 aa2.17□□□□□ -2.06
SLIRP-208ENST00000556956 TRAV26-2A0A0B4J265 109 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV4-28A0A0C4DH34 117 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 TRBV30A0A0K0K1B3 111 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 PRAC2D3DTV9 90 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 H3BMM0 161 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 J3QQQ9 107 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 M0R1W7 72 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 M0R2P5 195 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 OVOL1O14753 267 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 TIMM23O14925 209 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 IGHV3-33P01772 117 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 ACYP1P07311 99 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 CTSGP08311 255 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 MGPP08493 103 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 COX6CP09669 75 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 PRB4P10163 310 aaPredicted RBP2.16□□□□□ -2.06
SLIRP-208ENST00000556956 KRTAP10-8P60410 259 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 HERV-K104P63124 156 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 ADORA2A-AS1P86434 159 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 FAM27E3Q08E93 113 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 HES1Q14469 280 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 Q1RN00 199 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 LINC01620Q4KN68 170 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 MEIG1Q5JSS6 88 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 SFTA2Q6UW10 78 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 POM121L12Q8N7R1 296 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 C15orf53Q8NAA6 179 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 KLHL30-AS1Q8NEE0 82 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 FAM57AQ8TBR7 257 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 TMEM263Q8WUH6 116 aaKnown RBP2.16□□□□□ -2.06
SLIRP-208ENST00000556956 RASL10AQ92737 203 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 RNASE6Q93091 150 aaKnown RBP2.16□□□□□ -2.06
SLIRP-208ENST00000556956 UBE2WQ96B02 151 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 METTL26Q96S19 204 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 TIMM17AQ99595 171 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 KIR2DL4Q99706 377 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 ARRDC1-AS1Q9H2J1 176 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 YAE1D1Q9NRH1 226 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 CTSZQ9UBR2 303 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 PHLDA3Q9Y5J5 127 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 S4R3C0 116 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 EML6Q6ZMW3 1958 aa2.16□□□□□ -2.06
SLIRP-208ENST00000556956 ABCA7Q8IZY2 2146 aa2.15□□□□□ -2.06
SLIRP-208ENST00000556956 IGLV4-69A0A075B6H9 119 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 TRBV7-1A0A0A6YYK4 115 aa2.15□□□□□ -2.07
SLIRP-208ENST00000556956 TRAV4A0A0B4J268 109 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms