RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TP53TG3Q9ULZ0 132 aa17.27■□□□□ 0.35
SIX4-203ENST00000556952 MT-ND6P03923 174 aa17.26■□□□□ 0.35
SIX4-203ENST00000556952 CACNG7P62955 275 aa17.26■□□□□ 0.35
SIX4-203ENST00000556952 A8MZ25 164 aa17.24■□□□□ 0.35
SIX4-203ENST00000556952 FRMD6-AS1P0C7T7 363 aa17.24■□□□□ 0.35
SIX4-203ENST00000556952 CAMPP49913 170 aa17.24■□□□□ 0.35
SIX4-203ENST00000556952 PHLDA3Q9Y5J5 127 aa17.24■□□□□ 0.35
SIX4-203ENST00000556952 IGHV4-4A0A075B6R2 117 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 SNURFLB1AK76 121 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 HLA-DQA1P01909 254 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 TMEM136Q6ZRR5 245 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 OR10AG1Q8NH19 301 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 C9orf85Q96MD7 179 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 TIMM8BQ9Y5J9 83 aaPredicted RBP17.23■□□□□ 0.35
SIX4-203ENST00000556952 HTN1P15515 57 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 NTF3P20783 257 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 SPANXN1Q5VSR9 72 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 ZNF705AQ6ZN79 300 aaPredicted RBP17.23■□□□□ 0.35
SIX4-203ENST00000556952 GATD1Q8NB37 220 aa17.23■□□□□ 0.35
SIX4-203ENST00000556952 IGHV3OR16-12A0A075B7B8 117 aa17.22■□□□□ 0.35
SIX4-203ENST00000556952 RAB4BP61018 213 aa17.22■□□□□ 0.35
SIX4-203ENST00000556952 ZNF415Q09FC8 603 aa17.22■□□□□ 0.35
SIX4-203ENST00000556952 TWIST1Q15672 202 aa17.22■□□□□ 0.35
SIX4-203ENST00000556952 MDFICQ9P1T7 246 aa17.22■□□□□ 0.35
SIX4-203ENST00000556952 TRAPPC1Q9Y5R8 145 aa17.22■□□□□ 0.35
SIX4-203ENST00000556952 TGP01266 2768 aa17.22■□□□□ 0.35
SIX4-203ENST00000556952 DNAH9Q9NYC9 4486 aa17.21■□□□□ 0.35
SIX4-203ENST00000556952 MUC21A0A0G2JKD1 596 aa17.21■□□□□ 0.35
SIX4-203ENST00000556952 MUC21A0A140T8X8 626 aa17.21■□□□□ 0.35
SIX4-203ENST00000556952 UBE2CO00762 179 aa17.21■□□□□ 0.35
SIX4-203ENST00000556952 NXPH4O95158 308 aa17.2■□□□□ 0.34
SIX4-203ENST00000556952 TRGC2P03986 189 aa17.2■□□□□ 0.34
SIX4-203ENST00000556952 DEFB121Q5J5C9 76 aa17.2■□□□□ 0.34
SIX4-203ENST00000556952 ZFP82Q8N141 532 aa17.2■□□□□ 0.34
SIX4-203ENST00000556952 ZNF493Q6ZR52 646 aa17.19■□□□□ 0.34
SIX4-203ENST00000556952 FRZBQ92765 325 aa17.19■□□□□ 0.34
SIX4-203ENST00000556952 C1orf196B1AJZ1 125 aa17.19■□□□□ 0.34
SIX4-203ENST00000556952 SSTP61278 116 aa17.19■□□□□ 0.34
SIX4-203ENST00000556952 TMEM263Q8WUH6 116 aaKnown RBP17.19■□□□□ 0.34
SIX4-203ENST00000556952 MRPL18Q9H0U6 180 aaKnown RBP17.19■□□□□ 0.34
SIX4-203ENST00000556952 C11orf72Q8NBR9 251 aa17.18■□□□□ 0.34
SIX4-203ENST00000556952 M0R381 172 aa17.17■□□□□ 0.34
SIX4-203ENST00000556952 FABP9Q0Z7S8 132 aa17.17■□□□□ 0.34
SIX4-203ENST00000556952 SYT8Q8NBV8 401 aa17.17■□□□□ 0.34
SIX4-203ENST00000556952 RNASE8Q8TDE3 154 aaKnown RBP17.17■□□□□ 0.34
SIX4-203ENST00000556952 MSRB1Q9NZV6 116 aa17.17■□□□□ 0.34
SIX4-203ENST00000556952 MUC4Q99102 2169 aa17.17■□□□□ 0.34
SIX4-203ENST00000556952 TRGC1P0CF51 173 aa17.16■□□□□ 0.34
SIX4-203ENST00000556952 C16orf74Q96GX8 76 aa17.16■□□□□ 0.34
SIX4-203ENST00000556952 SPXQ9BT56 116 aa17.16■□□□□ 0.34
SIX4-203ENST00000556952 TMEM191AQ9H0A3 160 aa17.16■□□□□ 0.34
SIX4-203ENST00000556952 PHOX2AO14813 284 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 PRM2P04554 102 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 SMIM15Q7Z3B0 74 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 GSN-AS1Q9NRJ2 163 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 APCSP02743 223 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 AZU1P20160 251 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 RRN3P1Q2M238 152 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 RCHY1Q96PM5 261 aa17.15■□□□□ 0.34
SIX4-203ENST00000556952 RAB5BP61020 215 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 SLAQ13239 276 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 PIK3CD-AS1Q5SR53 167 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 DMRTA1Q5VZB9 504 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 Q6ZWC4 215 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 IL17DQ8TAD2 202 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 PTH2Q96A98 100 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 AP1S3Q96PC3 154 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 COL7A1Q02388 2944 aa17.14■□□□□ 0.33
SIX4-203ENST00000556952 SMIM9A6NGZ8 99 aa17.13■□□□□ 0.33
SIX4-203ENST00000556952 M0R2P5 195 aa17.13■□□□□ 0.33
SIX4-203ENST00000556952 SPRY2O43597 315 aa17.13■□□□□ 0.33
SIX4-203ENST00000556952 DEFB135Q30KP9 77 aa17.12■□□□□ 0.33
SIX4-203ENST00000556952 ZNF876PQ49A33 203 aa17.11■□□□□ 0.33
SIX4-203ENST00000556952 FAM104BQ5XKR9 115 aa17.11■□□□□ 0.33
SIX4-203ENST00000556952 TMA7Q9Y2S6 64 aaKnown RBP17.11■□□□□ 0.33
SIX4-203ENST00000556952 NDUFAF3Q9BU61 184 aa17.11■□□□□ 0.33
SIX4-203ENST00000556952 EVI2AP22794 236 aa17.1■□□□□ 0.33
SIX4-203ENST00000556952 X6R8D5 127 aa17.1■□□□□ 0.33
SIX4-203ENST00000556952 AMN1Q8IY45 258 aa17.09■□□□□ 0.33
SIX4-203ENST00000556952 RNF183Q96D59 192 aa17.09■□□□□ 0.33
SIX4-203ENST00000556952 DAZ2Q13117 558 aaKnown RBP17.08■□□□□ 0.32
SIX4-203ENST00000556952 DPH3P1Q9H4G8 78 aa17.08■□□□□ 0.32
SIX4-203ENST00000556952 PLAC8L1A1L4L8 177 aa17.07■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BKO60814 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BJP06899 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 SMIM17P0DL12 118 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BOP23527 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BBP33778 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BDP58876 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BCP62807 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST2H2BEQ16778 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 KIAA1644Q3SXP7 199 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BHQ93079 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BNQ99877 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HIST1H2BMQ99879 126 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 B9D2Q9BPU9 175 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 TP53TG1Q9Y2A0 90 aa17.06■□□□□ 0.32
SIX4-203ENST00000556952 HUWE1Q7Z6Z7 4374 aaKnown RBP17.06■□□□□ 0.32
SIX4-203ENST00000556952 LGALS9BQ3B8N2 356 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms