RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 RPL7L1Q6DKI1 246 aaKnown RBP1.95□□□□□ -2.1
GPHN-214ENST00000556633 CLEC19AQ6UXS0 136 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 LCA10Q71F78 164 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 LINC00337Q8N6G1 96 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 MORN4Q8NDC4 146 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 C1orf64Q8NEQ6 169 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 DCANP1Q8TF63 244 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 TOMM6Q96B49 74 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 SPACA5Q96QH8 159 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 DSCR8Q96T75 97 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 TRGV9Q99603 122 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 MGST2Q99735 147 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 C11orf68Q9H3H3 251 aaKnown RBP1.95□□□□□ -2.1
GPHN-214ENST00000556633 LINC00527Q9UJ94 153 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 LINC00588Q9Y4M8 146 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 SCN9AQ15858 1988 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 C5P01031 1676 aa1.95□□□□□ -2.1
GPHN-214ENST00000556633 CCDC88AQ3V6T2 1871 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 TNS1Q9HBL0 1735 aaKnown RBP1.94□□□□□ -2.1
GPHN-214ENST00000556633 HELZP42694 1942 aaKnown RBP1.94□□□□□ -2.1
GPHN-214ENST00000556633 TRAV8-3A0A0A6YYJ7 113 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 TRAV2A0A0B4J234 112 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 UBE2L5PA0A1B0GUS4 154 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 hADV29S1A0JD25 119 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 A8MUN3 132 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 F2Z2F3 143 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 M0R129 80 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 LST1O00453 97 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 CCL16O15467 120 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 BCE1O60756 84 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 SCGB1C2P0DMR2 95 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 LGALS3P17931 250 aaKnown RBP1.94□□□□□ -2.1
GPHN-214ENST00000556633 CCL23P55773 120 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 UBE2D3P61077 147 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 UBE2D2P62837 147 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 UBE2L3P68036 154 aaKnown RBP1.94□□□□□ -2.1
GPHN-214ENST00000556633 FAM104BQ5XKR9 115 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 C12orf73Q69YU5 71 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 NOXRED1Q6NXP6 359 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 EBLN2Q6P2I7 272 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
GPHN-214ENST00000556633 ATP5L2Q7Z4Y8 100 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 PRNTQ86SH4 94 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 BAGE3Q86Y29 109 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 BAGE2Q86Y30 109 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 WFDC11Q8NEX6 87 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 OR8A1Q8NGG7 326 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 FAM213BQ8TBF2 198 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 C10orf105Q8TEF2 133 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 TSKUQ8WUA8 353 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 H1FXQ92522 213 aaKnown RBP1.94□□□□□ -2.1
GPHN-214ENST00000556633 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 CXCL16Q9H2A7 254 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 CKLFQ9UBR5 152 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 SIPA1L3O60292 1781 aaPredicted RBP1.94□□□□□ -2.1
GPHN-214ENST00000556633 UBR2Q8IWV8 1755 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 DOCK3Q8IZD9 2030 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 ANKRD31Q8N7Z5 1873 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 SRCAPQ6ZRS2 3230 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 TJP1Q07157 1748 aa1.94□□□□□ -2.1
GPHN-214ENST00000556633 ALPK3Q96L96 1907 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 LAMB1P07942 1786 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 DOCK5Q9H7D0 1870 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 TNRC6AQ8NDV7 1962 aaKnown RBP1.93□□□□□ -2.1
GPHN-214ENST00000556633 H3BP45 60 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 C19orf84I3L1E1 186 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 HCRTO43612 131 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 ZNF73O43830 326 aaPredicted RBP1.93□□□□□ -2.1
GPHN-214ENST00000556633 ZNF80P51504 273 aaPredicted RBP1.93□□□□□ -2.1
GPHN-214ENST00000556633 EFNA4P52798 201 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 CAV3P56539 151 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 SNRPD3P62318 126 aaKnown RBP1.93□□□□□ -2.1
GPHN-214ENST00000556633 HBBP68871 147 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 CLLU1OSQ5K130 101 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 TMEM170BQ5T4T1 132 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 NCBP2-AS2Q69YL0 99 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 LINC00643Q86TS7 51 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 MARCH3Q86UD3 253 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 C3orf56Q8N813 242 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 LINC00304Q8N9R0 145 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 TMEM75Q8N9X5 138 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 CCL13Q99616 98 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 ZNF492Q9P255 531 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 LY96Q9Y6Y9 160 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 ATAD5Q96QE3 1844 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 PLXNB1O43157 2135 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 RREB1Q92766 1687 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 ADAMTS7Q9UKP4 1686 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 THSD7AQ9UPZ6 1657 aa1.93□□□□□ -2.1
GPHN-214ENST00000556633 QSER1Q2KHR3 1735 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 NUP188Q5SRE5 1749 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 NWD2Q9ULI1 1742 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 ITGB4P16144 1822 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 TRBV20OR9-2A0A075B6H5 130 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 C4orf51C9J302 202 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 E7EQL1 145 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 M0R381 172 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 IGLV3-27P01718 113 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 HBDP02042 147 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms