RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ZNF876PQ49A33 203 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 ZFAND6Q6FIF0 208 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 FAM231DQ6ZW35 169 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 ZNF575Q86XF7 245 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 SFRP2Q96HF1 295 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 IL36BQ9NZH7 164 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 PHLDA3Q9Y5J5 127 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 STAB2Q8WWQ8 2551 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 LGALS9BQ3B8N2 356 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 MUC7Q8TAX7 377 aa9.98□□□□□ -0.81
VIPAS39-208ENST00000556412 M0R381 172 aa9.97□□□□□ -0.81
VIPAS39-208ENST00000556412 IGHV3-53P01767 116 aa9.97□□□□□ -0.81
VIPAS39-208ENST00000556412 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
VIPAS39-208ENST00000556412 OSTCQ9NRP0 149 aa9.97□□□□□ -0.81
VIPAS39-208ENST00000556412 CXCL1P09341 107 aa9.96□□□□□ -0.81
VIPAS39-208ENST00000556412 DNLZQ5SXM8 178 aa9.96□□□□□ -0.81
VIPAS39-208ENST00000556412 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.81
VIPAS39-208ENST00000556412 PHLDA1Q8WV24 401 aaPredicted RBP9.96□□□□□ -0.81
VIPAS39-208ENST00000556412 DEFB131BA0A096LNP1 70 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 ATP5G1P05496 136 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 PNRC1Q12796 327 aaPredicted RBP9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 SLC7A5P1Q8MH63 180 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 LINC00612Q8N6U2 182 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 SYT8Q8NBV8 401 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 OR10AG1Q8NH19 301 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 RASL10AQ92737 203 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 SEC11CQ9BY50 192 aa9.96□□□□□ -0.82
VIPAS39-208ENST00000556412 TRAV10A0A0B4J240 114 aa9.95□□□□□ -0.82
VIPAS39-208ENST00000556412 SCRT2Q9NQ03 307 aa9.95□□□□□ -0.82
VIPAS39-208ENST00000556412 A8MWL6 223 aa9.94□□□□□ -0.82
VIPAS39-208ENST00000556412 F5H768 121 aa9.94□□□□□ -0.82
VIPAS39-208ENST00000556412 MED14OSP0DP75 135 aa9.94□□□□□ -0.82
VIPAS39-208ENST00000556412 DMRTA1Q5VZB9 504 aa9.94□□□□□ -0.82
VIPAS39-208ENST00000556412 ZFP82Q8N141 532 aa9.94□□□□□ -0.82
VIPAS39-208ENST00000556412 V9GYV3 84 aa9.94□□□□□ -0.82
VIPAS39-208ENST00000556412 SNAI2O43623 268 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 OR5AL1P0C617 328 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 IGLC6P0CF74 106 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 CT83Q5H943 113 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 LYZL1Q6UWQ5 148 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 A0A1W2PPQ1 181 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 GTSF1Q8WW33 167 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 PGLYRP4Q96LB8 373 aa9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-208ENST00000556412 IGHV3-73A0A0B4J1V6 119 aa9.92□□□□□ -0.82
VIPAS39-208ENST00000556412 RNF212Q495C1 297 aa9.92□□□□□ -0.82
VIPAS39-208ENST00000556412 CEMP1Q6PRD7 247 aaPredicted RBP9.92□□□□□ -0.82
VIPAS39-208ENST00000556412 ZNF479Q96JC4 524 aa9.92□□□□□ -0.82
VIPAS39-208ENST00000556412 JPT2Q9H910 190 aa9.92□□□□□ -0.82
VIPAS39-208ENST00000556412 TRAV4A0A0B4J268 109 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 NUPR2A6NF83 97 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 F2Z2F3 143 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 MT-ND4LP03901 98 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 PTH2Q96A98 100 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 C18orf15Q96N68 181 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 TRGV4A0A0C4DH28 118 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 HIGD1CA8MV81 97 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 IGLL5B9A064 214 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 HOXA5P20719 270 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 FAM74A4Q5TZK3 123 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 POM121L12Q8N7R1 296 aa9.91□□□□□ -0.82
VIPAS39-208ENST00000556412 A0A087WWL8 130 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 A8MWV9 139 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 PPP1R2P9O14990 202 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 APOC3P02656 99 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 CTRLP40313 264 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 CACNG7P62955 275 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 BORCS7Q96B45 105 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 NDUFAF3Q9BU61 184 aa9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 CARHSP1Q9Y2V2 147 aaKnown RBP9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 KLK5Q9Y337 293 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-208ENST00000556412 C3orf84H3BNL1 204 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 RS1O15537 224 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 TWIST1Q15672 202 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 SAMD10Q9BYL1 202 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 GFRA4Q9GZZ7 299 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 A0A0J9YY99 117 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 NXPH4O95158 308 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 NTF3P20783 257 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 PIK3CD-AS1Q5SR53 167 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 C10orf91Q5T1B1 145 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 NAT8BQ9UHF3 227 aa9.89□□□□□ -0.83
VIPAS39-208ENST00000556412 TRAV26-1A0A087WT03 109 aa9.88□□□□□ -0.83
VIPAS39-208ENST00000556412 CASC10Q5T4H9 136 aa9.88□□□□□ -0.83
VIPAS39-208ENST00000556412 C14orf178Q8N769 122 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-208ENST00000556412 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
VIPAS39-208ENST00000556412 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
VIPAS39-208ENST00000556412 FAM231BA6NCW3 169 aa9.87□□□□□ -0.83
VIPAS39-208ENST00000556412 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
VIPAS39-208ENST00000556412 FHL2Q14192 279 aa9.87□□□□□ -0.83
VIPAS39-208ENST00000556412 NUP35Q8NFH5 326 aa9.87□□□□□ -0.83
VIPAS39-208ENST00000556412 HHLA3Q9XRX5 114 aa9.87□□□□□ -0.83
VIPAS39-208ENST00000556412 IGHV4-4A0A075B6R2 117 aa9.86□□□□□ -0.83
VIPAS39-208ENST00000556412 SMIM27A0A1W2PRY6 76 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms