RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 HERC2O95714 4834 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 IGHV4-4A0A075B6R2 117 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 SNAI2O43623 268 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 ESDP10768 282 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 HLA-DRB4P13762 266 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 CDKN1BP46527 198 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 WFDC3Q8IUB2 231 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 SSBP4Q9BWG4 385 aaPredicted RBP8.15□□□□□ -1.1
CHGA-205ENST00000556098 HLA-DRB4X5D2U9 266 aa8.15□□□□□ -1.1
CHGA-205ENST00000556098 C7orf71A4D174 169 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 SPINK4O60575 86 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 CD7P09564 240 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 EDN2P20800 178 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 CAMPP49913 170 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 TDRG1Q3Y452 100 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 LYZL1Q6UWQ5 148 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 TMEM18Q96B42 140 aa8.14□□□□□ -1.11
CHGA-205ENST00000556098 IGKV3D-20A0A0C4DH25 116 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 PPBPP02775 128 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 SMIM6P0DI80 62 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 ASIPP42127 132 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 TFPI2P48307 235 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 CD300EQ496F6 205 aaPredicted RBP8.13□□□□□ -1.11
CHGA-205ENST00000556098 HIST3H2BBQ8N257 126 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 TMEM191AQ9H0A3 160 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
CHGA-205ENST00000556098 LOC102724200A0A096LPH7 203 aaPredicted RBP8.12□□□□□ -1.11
CHGA-205ENST00000556098 OR11H12B2RN74 326 aa8.12□□□□□ -1.11
CHGA-205ENST00000556098 GZMBP10144 247 aa8.12□□□□□ -1.11
CHGA-205ENST00000556098 SRIP30626 198 aa8.12□□□□□ -1.11
CHGA-205ENST00000556098 SLAQ13239 276 aa8.12□□□□□ -1.11
CHGA-205ENST00000556098 FAM159AQ6UWV7 190 aa8.12□□□□□ -1.11
CHGA-205ENST00000556098 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
CHGA-205ENST00000556098 TMSB15BA0A087X1C1 80 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 A0A0J9YWU9 116 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 F6UB75 175 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 S100A4P26447 101 aaKnown RBP8.11□□□□□ -1.11
CHGA-205ENST00000556098 DEFB131AP59861 70 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 PRR9Q5T870 116 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 FAM104BQ5XKR9 115 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 LINC00467Q9BRT7 94 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 ALKBH7Q9BT30 221 aaPredicted RBP8.11□□□□□ -1.11
CHGA-205ENST00000556098 TPPP3Q9BW30 176 aa8.11□□□□□ -1.11
CHGA-205ENST00000556098 TRGV11A0A075B6L2 103 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 H3BMM0 161 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 ZNF705DP0CH99 300 aaPredicted RBP8.1□□□□□ -1.11
CHGA-205ENST00000556098 ZNF705BP0CI00 300 aaPredicted RBP8.1□□□□□ -1.11
CHGA-205ENST00000556098 RAB4AP20338 218 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 PMCHP20382 165 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 RNASE4P34096 147 aaKnown RBP8.1□□□□□ -1.11
CHGA-205ENST00000556098 AKR1D1P51857 326 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 NUTF2P61970 127 aaKnown RBP8.1□□□□□ -1.11
CHGA-205ENST00000556098 TWIST1Q15672 202 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 GDF5OSQ5U4N7 250 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 AMTNQ6UX39 209 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 CHCHD1Q96BP2 118 aaKnown RBP8.1□□□□□ -1.11
CHGA-205ENST00000556098 SCRT2Q9NQ03 307 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 AGRNO00468 2067 aa8.1□□□□□ -1.11
CHGA-205ENST00000556098 NXPH4O95158 308 aa8.09□□□□□ -1.11
CHGA-205ENST00000556098 NTF3P20783 257 aa8.09□□□□□ -1.11
CHGA-205ENST00000556098 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
CHGA-205ENST00000556098 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
CHGA-205ENST00000556098 ORMDL3Q8N138 153 aa8.09□□□□□ -1.11
CHGA-205ENST00000556098 TMEM256Q8N2U0 113 aa8.09□□□□□ -1.11
CHGA-205ENST00000556098 C11orf21Q9P2W6 132 aa8.09□□□□□ -1.11
CHGA-205ENST00000556098 KLK5Q9Y337 293 aaPredicted RBP8.09□□□□□ -1.11
CHGA-205ENST00000556098 IGHV1OR15-1A0A075B7D0 117 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 ZNF324O75467 553 aaPredicted RBP8.08□□□□□ -1.12
CHGA-205ENST00000556098 PPP1R17O96001 155 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 ANXA2RQ3ZCQ2 193 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 GFI1BQ5VTD9 330 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 SYT8Q8NBV8 401 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 AP1S3Q96PC3 154 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 HIST1H2BLQ99880 126 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 NDUFAF3Q9BU61 184 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 NAGKQ9UJ70 344 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 TP53TG3Q9ULZ0 132 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 PHLDA3Q9Y5J5 127 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 HECTD4Q9Y4D8 3996 aa8.08□□□□□ -1.12
CHGA-205ENST00000556098 GRIFINA4D1Z8 144 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 H3BVH4 76 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 INSP01308 110 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
CHGA-205ENST00000556098 STHQ8IWL8 128 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 PTH2Q96A98 100 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 MRAP2Q96G30 205 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 C1QTNF4Q9BXJ3 329 aa8.07□□□□□ -1.12
CHGA-205ENST00000556098 TRAV12-3A0A0B4J271 114 aa8.06□□□□□ -1.12
CHGA-205ENST00000556098 HSBP1O75506 76 aa8.06□□□□□ -1.12
CHGA-205ENST00000556098 SERF1AO75920 110 aa8.06□□□□□ -1.12
CHGA-205ENST00000556098 PRB4P10163 310 aaPredicted RBP8.06□□□□□ -1.12
CHGA-205ENST00000556098 FABP4P15090 132 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms