RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 CCKP06307 115 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 CD28P10747 220 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 FUSP35637 526 aaKnown RBP eCLIP1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 RPL30P62888 115 aaKnown RBP1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 BLCAPP62952 87 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 KLKP1Q107X0 134 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 Q1T7F1 81 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 NOXRED1Q6NXP6 359 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 C6orf201Q7Z4U5 140 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 FAM216BQ8N7L0 139 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 CCL4L1Q8NHW4 92 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 OSTCQ9NRP0 149 aa1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF706Q9Y5V0 76 aaPredicted RBP1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 COL5A3P25940 1745 aaPredicted RBP1.88□□□□□ -2.11
MTHFD1-212ENST00000555858 ARFGEF2Q9Y6D5 1785 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 ROBO1Q9Y6N7 1651 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 TNRC6AQ8NDV7 1962 aaKnown RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 TRAV13-2A0A0B4J235 113 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 IGHV1-3A0A0C4DH29 117 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 C2orf70A6NJV1 201 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 A6NN06 94 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 C3orf84H3BNL1 204 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 FXYD1O00168 92 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 CPSF4O95639 269 aaKnown RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF32P17041 273 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 GCHFRP30047 84 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 EFNA4P52798 201 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 DSCR4P56555 118 aaPredicted RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 KRTAP10-6P60371 365 aaPredicted RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 UBE2D3P61077 147 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 UBE2D2P62837 147 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 RPL18Q07020 188 aaKnown RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 TJP1Q07157 1748 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 CIRBPQ14011 172 aaKnown RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 INSL4Q14641 139 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 SS18Q15532 418 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 RHOHQ15669 191 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 NUP188Q5SRE5 1749 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 PATE2Q6UY27 113 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 MIR17HGQ75NE6 70 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 MARCH3Q86UD3 253 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 KRTAP11-1Q8IUC1 163 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 ORMDL3Q8N138 153 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 CLDND2Q8NHS1 167 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 WFDC5Q8TCV5 224 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 IFI27L1Q96BM0 104 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 RNF5Q99942 180 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 PLXNA4Q9HCM2 1894 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 KLK12Q9UKR0 248 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 KIF26AQ9ULI4 1882 aaPredicted RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 RGPD3A6NKT7 1758 aaPredicted RBP1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 ANKRD36CQ5JPF3 1778 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 SCN9AQ15858 1988 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 BTAF1O14981 1849 aa1.87□□□□□ -2.11
MTHFD1-212ENST00000555858 NUP205Q92621 2012 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 UBR1Q8IWV7 1749 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 HELZP42694 1942 aaKnown RBP1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 CRYM-AS1A6NIL9 109 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 H7BZZ5 65 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 NPYP01303 97 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 IL4P05112 153 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 PIRTP0C851 137 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 RPL27AP46776 148 aaKnown RBP1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 ESRGQ1W209 222 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 LUZP6Q538Z0 58 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 SPANXN1Q5VSR9 72 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 C16orf47Q6ZP98 133 aaPredicted RBP1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 PDPNQ86YL7 162 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 DYNLRB2Q8TF09 96 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 ITLN2Q8WWU7 325 aaPredicted RBP1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 CLEC2BQ92478 149 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 RNASE6Q93091 150 aaKnown RBP1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 Q96M85 177 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 LINC00467Q9BRT7 94 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 SLC50A1Q9BRV3 221 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 CMC2Q9NRP2 79 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 ARL2-SNX15V9GYD0 113 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 SCN10AQ9Y5Y9 1956 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 PATJQ8NI35 1801 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 RREB1Q92766 1687 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 PDCD11Q14690 1871 aaKnown RBP1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 QSER1Q2KHR3 1735 aa1.86□□□□□ -2.11
MTHFD1-212ENST00000555858 SIPA1L3O60292 1781 aaPredicted RBP1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 KDM6BO15054 1643 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 DOCK2Q92608 1830 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 TUBGCP6Q96RT7 1819 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 CCDC88CQ9P219 2028 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 TRBV7-3A0A075B6L6 115 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV1-6A0A0C4DH72 117 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 A0A1W2PQD3 144 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 H3BMM0 161 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 SLC25A20O43772 301 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV1-39P01597 117 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 PRH1P02810 166 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV1-16P04430 117 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV1D-39P04432 117 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 SLC25A16P16260 332 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 NPPCP23582 126 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms