RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 DUSP14O95147 198 aaKnown RBP4.59□□□□□ -1.67
LINC00643-203ENST00000555518 P01737 135 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 GIG44P09565 113 aaPredicted RBP4.59□□□□□ -1.67
LINC00643-203ENST00000555518 FRMD6-AS1P0C7T7 363 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 RBMY1A1P0DJD3 496 aaKnown RBP4.59□□□□□ -1.67
LINC00643-203ENST00000555518 RBMY1CP0DJD4 496 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 RBMY1FQ15415 496 aaKnown RBP4.59□□□□□ -1.67
LINC00643-203ENST00000555518 ACTL10Q5JWF8 245 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 EBLN2Q6P2I7 272 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 OR2D3Q8NGH3 330 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 TSKUQ8WUA8 353 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 NDFIP1Q9BT67 221 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 MCRIP2Q9BUT9 160 aaKnown RBP4.59□□□□□ -1.67
LINC00643-203ENST00000555518 URGCP-MRPS24S4R325 110 aa4.59□□□□□ -1.67
LINC00643-203ENST00000555518 PKD1L1Q8TDX9 2849 aa4.59□□□□□ -1.68
LINC00643-203ENST00000555518 MGAM2Q2M2H8 2515 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 C7orf71A4D174 169 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 FABP5P3A8MUU1 101 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 OR11H12B2RN74 326 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 PHOX2AO14813 284 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 IGKV3-20P01619 116 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 TYMSP04818 313 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 IGLC6P0CF74 106 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 GZMBP10144 247 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 LEPP41159 167 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 FOXA3P55318 350 aaPredicted RBP4.58□□□□□ -1.68
LINC00643-203ENST00000555518 TCL1AP56279 114 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 SPINK13Q1W4C9 94 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 GFI1BQ5VTD9 330 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 GFRA4Q9GZZ7 299 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 NOTCH1P46531 2555 aa4.58□□□□□ -1.68
LINC00643-203ENST00000555518 TRAV12-2A0A075B6T6 113 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 TRAV9-1A0A075B6T8 112 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 TRAV21A0A0B4J279 112 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 A0A1W2PPQ1 181 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 TMEM189A5PLL7 270 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 FAM231BA6NCW3 169 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 HIGD1CA8MV81 97 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 A8MWL6 223 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 GPX1P07203 203 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 RNASE4P34096 147 aaKnown RBP4.57□□□□□ -1.68
LINC00643-203ENST00000555518 CTRLP40313 264 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 CDKN1BP46527 198 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 CMC4P56277 68 aaPredicted RBP4.57□□□□□ -1.68
LINC00643-203ENST00000555518 FXYD7P58549 80 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 EGFEM1PQ0D2K5 195 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 DEFB125Q8N687 156 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 NUP35Q8NFH5 326 aa4.57□□□□□ -1.68
LINC00643-203ENST00000555518 NBEAL1Q6ZS30 2694 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 TMSB15BA0A087X1C1 80 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 IGLV5-39A0A0G2JS06 123 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 GRIFINA4D1Z8 144 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 RHODO00212 210 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 SNAI2O43623 268 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 RAB5AP20339 215 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 TSPOP30536 169 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 TDRG1Q3Y452 100 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 DNLZQ5SXM8 178 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 KCNIP4Q6PIL6 250 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 C1orf158Q8N1D5 194 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.56□□□□□ -1.68
LINC00643-203ENST00000555518 FAM210BQ96KR6 192 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 CNFNQ9BYD5 112 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 NAT8BQ9UHF3 227 aa4.56□□□□□ -1.68
LINC00643-203ENST00000555518 TRAV12-3A0A0B4J271 114 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 ORM1P02763 201 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 ARMS2P0C7Q2 107 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 RNASE3P12724 160 aaKnown RBP4.55□□□□□ -1.68
LINC00643-203ENST00000555518 S100PP25815 95 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 RPS20P60866 119 aaKnown RBP4.55□□□□□ -1.68
LINC00643-203ENST00000555518 MUC21Q5SSG8 566 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 MRPL54Q6P161 138 aaKnown RBP4.55□□□□□ -1.68
LINC00643-203ENST00000555518 LYZL1Q6UWQ5 148 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 TMEM136Q6ZRR5 245 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 STHQ8IWL8 128 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 CSNK1G2-AS1Q8NCQ2 148 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 BTF3L4Q96K17 158 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 PGLYRP4Q96LB8 373 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 LINC00467Q9BRT7 94 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 SRD5A3Q9H8P0 318 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 SCRT2Q9NQ03 307 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 MDFICQ9P1T7 246 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 TP53TG3Q9ULZ0 132 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 MUC4Q99102 2169 aa4.55□□□□□ -1.68
LINC00643-203ENST00000555518 IGHV4-4A0A075B6R2 117 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 IGHV1OR15-1A0A075B7D0 117 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 IGHV3-16A0A0C4DH30 117 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 G3V4G9 280 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 GNRH2O43555 120 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 SPINK4O60575 86 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 NXPH4O95158 308 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 OR5AL1P0C617 328 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 RPL35AP18077 110 aaKnown RBP4.54□□□□□ -1.68
LINC00643-203ENST00000555518 ATP5L2Q7Z4Y8 100 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 FER1L6-AS1Q8NA97 138 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 C9orf85Q96MD7 179 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 C20orf144Q9BQM9 153 aa4.54□□□□□ -1.68
LINC00643-203ENST00000555518 MUC21A0A0G2JKD1 596 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms