RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
XRCC3-211ENST00000555055 NAA38Q9BRA0 125 aaKnown RBP11.28□□□□□ -0.6
XRCC3-211ENST00000555055 CHAC1Q9BUX1 264 aa11.28□□□□□ -0.6
XRCC3-211ENST00000555055 F8W1H4 67 aa11.28□□□□□ -0.6
XRCC3-211ENST00000555055 J3QR89 54 aa11.28□□□□□ -0.6
XRCC3-211ENST00000555055 ATP5LO75964 103 aa11.28□□□□□ -0.6
XRCC3-211ENST00000555055 WFDC12Q8WWY7 111 aa11.28□□□□□ -0.6
XRCC3-211ENST00000555055 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
XRCC3-211ENST00000555055 FAM223BA6NKX1 122 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 FXYD2P54710 66 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 TWIST1Q15672 202 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 Q5PR19 223 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 GPHB5Q86YW7 130 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 FAM223AQ8IWN6 122 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 LINC01356Q8N9X3 169 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 CR1P17927 2039 aa11.27□□□□□ -0.6
XRCC3-211ENST00000555055 E9PLD3 99 aa11.27□□□□□ -0.61
XRCC3-211ENST00000555055 RAB9AP51151 201 aa11.27□□□□□ -0.61
XRCC3-211ENST00000555055 KLK9Q2XQG4 91 aa11.27□□□□□ -0.61
XRCC3-211ENST00000555055 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.61
XRCC3-211ENST00000555055 TEX48A0A1B0GUV7 120 aa11.26□□□□□ -0.61
XRCC3-211ENST00000555055 GCSHP23434 173 aa11.26□□□□□ -0.61
XRCC3-211ENST00000555055 PRR9Q5T870 116 aa11.26□□□□□ -0.61
XRCC3-211ENST00000555055 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
XRCC3-211ENST00000555055 SIGMAR1Q99720 223 aa11.26□□□□□ -0.61
XRCC3-211ENST00000555055 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
XRCC3-211ENST00000555055 IGKCP01834 107 aa11.26□□□□□ -0.61
XRCC3-211ENST00000555055 CEND1Q8N111 149 aa11.26□□□□□ -0.61
XRCC3-211ENST00000555055 WFDC3Q8IUB2 231 aa11.25□□□□□ -0.61
XRCC3-211ENST00000555055 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
XRCC3-211ENST00000555055 U3KQE9 123 aa11.25□□□□□ -0.61
XRCC3-211ENST00000555055 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
XRCC3-211ENST00000555055 LINC01619G3V211 115 aa11.25□□□□□ -0.61
XRCC3-211ENST00000555055 CD300EQ496F6 205 aaPredicted RBP11.25□□□□□ -0.61
XRCC3-211ENST00000555055 PSMG3-AS1Q96PY0 264 aa11.25□□□□□ -0.61
XRCC3-211ENST00000555055 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
XRCC3-211ENST00000555055 AGRNO00468 2067 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 TRBV25-1A0A075B6N4 114 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 DPM2O94777 84 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 IGKV2D-26A0A0A0MRZ7 120 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 SLC25A16P16260 332 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
XRCC3-211ENST00000555055 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
XRCC3-211ENST00000555055 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 SLC50A1Q9BRV3 221 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 WNK1Q9H4A3 2382 aa11.24□□□□□ -0.61
XRCC3-211ENST00000555055 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
XRCC3-211ENST00000555055 SPANXB1Q9NS25 103 aaPredicted RBP11.23□□□□□ -0.61
XRCC3-211ENST00000555055 GATA1P15976 413 aaPredicted RBP11.23□□□□□ -0.61
XRCC3-211ENST00000555055 LEPP41159 167 aa11.23□□□□□ -0.61
XRCC3-211ENST00000555055 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
XRCC3-211ENST00000555055 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
XRCC3-211ENST00000555055 AZU1P20160 251 aa11.23□□□□□ -0.61
XRCC3-211ENST00000555055 Q8N8P6 123 aa11.23□□□□□ -0.61
XRCC3-211ENST00000555055 Q96MF0 132 aa11.23□□□□□ -0.61
XRCC3-211ENST00000555055 TNFRSF6BO95407 300 aa11.22□□□□□ -0.61
XRCC3-211ENST00000555055 IGHV4-31P0DP07 118 aa11.22□□□□□ -0.61
XRCC3-211ENST00000555055 IGLL5B9A064 214 aa11.22□□□□□ -0.61
XRCC3-211ENST00000555055 NDUFA4O00483 81 aa11.22□□□□□ -0.61
XRCC3-211ENST00000555055 NOTCH2Q04721 2471 aa11.21□□□□□ -0.61
XRCC3-211ENST00000555055 A0A1B0GV72 72 aa11.21□□□□□ -0.61
XRCC3-211ENST00000555055 GAGE12HA6NDE8 117 aa11.21□□□□□ -0.61
XRCC3-211ENST00000555055 HOXA3O43365 443 aaPredicted RBP11.21□□□□□ -0.61
XRCC3-211ENST00000555055 TCTAP57738 103 aa11.21□□□□□ -0.61
XRCC3-211ENST00000555055 DSCR9P59020 149 aa11.21□□□□□ -0.61
XRCC3-211ENST00000555055 A0A1B0GWB2 263 aa11.21□□□□□ -0.62
XRCC3-211ENST00000555055 PRSS1P07477 247 aa11.21□□□□□ -0.62
XRCC3-211ENST00000555055 CFHR3Q02985 330 aa11.21□□□□□ -0.62
XRCC3-211ENST00000555055 USMG5Q96IX5 58 aa11.21□□□□□ -0.62
XRCC3-211ENST00000555055 IGLV2-18A0A075B6J9 118 aa11.2□□□□□ -0.62
XRCC3-211ENST00000555055 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
XRCC3-211ENST00000555055 NHP2Q9NX24 153 aaKnown RBP11.2□□□□□ -0.62
XRCC3-211ENST00000555055 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
XRCC3-211ENST00000555055 ZC2HC1BQ5TFG8 222 aa11.2□□□□□ -0.62
XRCC3-211ENST00000555055 C18orf65Q6ZTR6 163 aa11.2□□□□□ -0.62
XRCC3-211ENST00000555055 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
XRCC3-211ENST00000555055 HECTD1Q9ULT8 2610 aa11.19□□□□□ -0.62
XRCC3-211ENST00000555055 K7ERJ3 54 aa11.19□□□□□ -0.62
XRCC3-211ENST00000555055 PSMB8P28062 276 aa11.19□□□□□ -0.62
XRCC3-211ENST00000555055 DEFB136Q30KP8 78 aa11.19□□□□□ -0.62
XRCC3-211ENST00000555055 DEFB113Q30KQ7 82 aa11.19□□□□□ -0.62
XRCC3-211ENST00000555055 FOXC2Q99958 501 aa11.19□□□□□ -0.62
XRCC3-211ENST00000555055 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
XRCC3-211ENST00000555055 RBAKDNA6NC62 111 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 H3BVH4 76 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 SOCS3O14543 225 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 GATA3P23771 443 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 PLNP26678 52 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 DUX3Q96PT4 197 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 TSSC4Q9Y5U2 329 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-211ENST00000555055 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 C12orf74Q32Q52 190 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 ATP6V0BQ99437 205 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
XRCC3-211ENST00000555055 UFC1Q9Y3C8 167 aa11.18□□□□□ -0.62
XRCC3-211ENST00000555055 TCTEX1D4Q5JR98 221 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 PDZD2O15018 2839 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms