RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 NCBP2LA6PVI3 153 aaKnown RBP10.25□□□□□ -0.77
SIX1-203ENST00000554986 EGR2P11161 476 aaPredicted RBP10.25□□□□□ -0.77
SIX1-203ENST00000554986 MORN3Q6PF18 240 aaPredicted RBP10.25□□□□□ -0.77
SIX1-203ENST00000554986 Q6ZUT4 128 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 ZNF491Q8N8L2 437 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 M0R3E3 92 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 BRD3OSQ6XYD6 125 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 ZNF575Q86XF7 245 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 ASCL2Q99929 193 aa10.25□□□□□ -0.77
SIX1-203ENST00000554986 MRPL35Q9NZE8 188 aaKnown RBP10.25□□□□□ -0.77
SIX1-203ENST00000554986 HOXA3O43365 443 aaPredicted RBP10.24□□□□□ -0.77
SIX1-203ENST00000554986 MYOZ3Q8TDC0 251 aa10.24□□□□□ -0.77
SIX1-203ENST00000554986 RPEQ96AT9 228 aa10.24□□□□□ -0.77
SIX1-203ENST00000554986 IGHV1-69DA0A0B4J2H0 117 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 IGHV1-69P01742 117 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
SIX1-203ENST00000554986 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 PPDPFLQ8WWR9 84 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 MYMXA0A1B0GTQ4 84 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 A6NJY4 79 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 K7EIM0 57 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 IL4P05112 153 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 UBE2E1P51965 193 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 PPP1R27Q86WC6 154 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 OR11H6Q8NGC7 330 aa10.23□□□□□ -0.77
SIX1-203ENST00000554986 NIPBLQ6KC79 2804 aaeCLIP10.22□□□□□ -0.77
SIX1-203ENST00000554986 CUBNO60494 3623 aa10.22□□□□□ -0.77
SIX1-203ENST00000554986 ODF3BA8MYP8 253 aa10.22□□□□□ -0.77
SIX1-203ENST00000554986 SBSPONQ8IVN8 264 aa10.22□□□□□ -0.77
SIX1-203ENST00000554986 RNF5Q99942 180 aa10.22□□□□□ -0.77
SIX1-203ENST00000554986 NPFFO15130 113 aa10.21□□□□□ -0.77
SIX1-203ENST00000554986 IGLV1-47P01700 117 aa10.21□□□□□ -0.77
SIX1-203ENST00000554986 MT-ATP8P03928 68 aa10.21□□□□□ -0.77
SIX1-203ENST00000554986 LAGE3Q14657 143 aa10.21□□□□□ -0.77
SIX1-203ENST00000554986 NFE4Q86UQ8 179 aa10.21□□□□□ -0.77
SIX1-203ENST00000554986 AJUBAQ96IF1 538 aa10.21□□□□□ -0.77
SIX1-203ENST00000554986 AGRNO00468 2067 aa10.21□□□□□ -0.77
SIX1-203ENST00000554986 F8VRH5 84 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 H7C1H1 209 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 SAA4P35542 130 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 UBE2D1P51668 147 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 XGP55808 180 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 UBE2D3P61077 147 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 UBE2D2P62837 147 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 TEN1Q86WV5 123 aa10.21□□□□□ -0.78
SIX1-203ENST00000554986 K7EMI3 77 aa10.2□□□□□ -0.78
SIX1-203ENST00000554986 ZNF80P51504 273 aaPredicted RBP10.2□□□□□ -0.78
SIX1-203ENST00000554986 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
SIX1-203ENST00000554986 PLXNB1O43157 2135 aa10.2□□□□□ -0.78
SIX1-203ENST00000554986 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 CRLF1O75462 422 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 GAS8-AS1O95177 125 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 SRD5A1P18405 259 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 FHL3Q13643 280 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 TEX29Q8N6K0 151 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 MSRB1Q9NZV6 116 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 IGKV2-40A0A087WW87 121 aaPredicted RBP10.19□□□□□ -0.78
SIX1-203ENST00000554986 M0QXV9 152 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 IGKV2D-40P01614 121 aaPredicted RBP10.19□□□□□ -0.78
SIX1-203ENST00000554986 RPL7P18124 248 aaKnown RBP10.19□□□□□ -0.78
SIX1-203ENST00000554986 CNTFRP26992 372 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 C9orf139Q6ZV77 190 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 DYNAPQ8N1N2 210 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 RNF183Q96D59 192 aa10.19□□□□□ -0.78
SIX1-203ENST00000554986 TRBV20-1A0A075B6N2 111 aa10.18□□□□□ -0.78
SIX1-203ENST00000554986 APELAP0DMC3 54 aa10.18□□□□□ -0.78
SIX1-203ENST00000554986 GAGE5Q13069 117 aa10.18□□□□□ -0.78
SIX1-203ENST00000554986 GAGE6Q13070 117 aa10.18□□□□□ -0.78
SIX1-203ENST00000554986 NRACQ8N912 160 aa10.18□□□□□ -0.78
SIX1-203ENST00000554986 IGHV3-72A0A0B4J1Y9 119 aa10.17□□□□□ -0.78
SIX1-203ENST00000554986 LY6LH3BQJ8 138 aa10.17□□□□□ -0.78
SIX1-203ENST00000554986 BUB1B-PAK6H3BSN5 160 aa10.17□□□□□ -0.78
SIX1-203ENST00000554986 LGALS1P09382 135 aaKnown RBP10.17□□□□□ -0.78
SIX1-203ENST00000554986 DEFB112Q30KQ8 113 aa10.17□□□□□ -0.78
SIX1-203ENST00000554986 CARD19Q96LW7 228 aa10.17□□□□□ -0.78
SIX1-203ENST00000554986 IGHV1-3A0A0C4DH29 117 aa10.17□□□□□ -0.78
SIX1-203ENST00000554986 ORM1P02763 201 aa10.16□□□□□ -0.78
SIX1-203ENST00000554986 PPIFP30405 207 aaKnown RBP10.16□□□□□ -0.78
SIX1-203ENST00000554986 MINOS1Q5TGZ0 78 aa10.16□□□□□ -0.78
SIX1-203ENST00000554986 ANAPC13Q9BS18 74 aa10.16□□□□□ -0.78
SIX1-203ENST00000554986 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
SIX1-203ENST00000554986 MINOS1-NBL1R4GNA1 71 aa10.16□□□□□ -0.78
SIX1-203ENST00000554986 NF1P21359 2839 aa10.16□□□□□ -0.78
SIX1-203ENST00000554986 IGHV4-4A0A075B6R2 117 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 RBAKDNA6NC62 111 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 ZNF688P0C7X2 276 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 GATA1P15976 413 aaPredicted RBP10.15□□□□□ -0.78
SIX1-203ENST00000554986 ZFAND6Q6FIF0 208 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 CFAP161Q6P656 301 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 CITED1Q99966 193 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 NDUFA3O95167 84 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 TMEM78Q5T7P6 136 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
SIX1-203ENST00000554986 SETD2Q9BYW2 2564 aaPredicted RBP10.15□□□□□ -0.79
SIX1-203ENST00000554986 LINC01549A6NIU2 74 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 IGHG4P01861 327 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 CD7P09564 240 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms