RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 SAMD13Q5VXD3 122 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 CYP2G1PQ6ZSU1 146 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 OR9Q1Q8NGQ5 310 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 SMIM11BQ8TCY0 68 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 METTL1Q9UBP6 276 aaKnown RBP-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 NDUFAF1Q9Y375 327 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 PTPRGP23470 1445 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 LRP5O75197 1615 aa-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 NSD1Q96L73 2696 aaPredicted RBP-0.42□□□□□ -2.48
PCNX1-208ENST00000554707 ABCA1O95477 2261 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 MUC12Q9UKN1 5478 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 A0A1B0GW64 132 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 RBAKDNA6NC62 111 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 PGRMC1O00264 195 aaKnown RBP-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 TMEM128Q5BJH2 165 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 SLC35B3Q9H1N7 401 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 TAS2R8Q9NYW2 309 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 NINQ8N4C6 2090 aa-0.43□□□□□ -2.48
PCNX1-208ENST00000554707 HMCN2Q8NDA2 5059 aa-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 MT-ND4LP03901 98 aa-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 PAEPP09466 180 aa-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 SLC25A6P12236 298 aa-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 SNX29P2Q8IUI4 249 aa-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 C4orf33Q8N1A6 199 aa-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 IFI27L1Q96BM0 104 aa-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 CDK13Q14004 1512 aaKnown RBP-0.44□□□□□ -2.48
PCNX1-208ENST00000554707 WNK2Q9Y3S1 2297 aa-0.45□□□□□ -2.48
PCNX1-208ENST00000554707 A0A1B0GV72 72 aa-0.45□□□□□ -2.48
PCNX1-208ENST00000554707 S100GP29377 79 aa-0.45□□□□□ -2.48
PCNX1-208ENST00000554707 OR2T2Q6IF00 324 aa-0.45□□□□□ -2.48
PCNX1-208ENST00000554707 DLEC1Q9Y238 1755 aa-0.45□□□□□ -2.48
PCNX1-208ENST00000554707 MED23Q9ULK4 1368 aa-0.45□□□□□ -2.48
PCNX1-208ENST00000554707 F8P00451 2351 aa-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 TRBV7-1A0A0A6YYK4 115 aa-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 ACYP2P14621 99 aa-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 DYNLRB2Q8TF09 96 aa-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 TMEM242Q9NWH2 141 aa-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 NOP16Q9Y3C1 178 aaKnown RBP-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 UNC13BO14795 1591 aa-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 SPAG17Q6Q759 2223 aa-0.46□□□□□ -2.48
PCNX1-208ENST00000554707 FLNCQ14315 2725 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 LAMC3Q9Y6N6 1575 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 SMIM24O75264 130 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 DPM2O94777 84 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 FABP1P07148 127 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 OR8B8Q15620 311 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 TMEM244Q5VVB8 128 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 TMEM91Q6ZNR0 172 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 OR8I2Q8N0Y5 310 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 C20orf197Q8N268 126 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 BANF2Q9H503 90 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 DNAJC15Q9Y5T4 150 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 V9GYQ6 96 aa-0.47□□□□□ -2.48
PCNX1-208ENST00000554707 AHCTF1Q8WYP5 2266 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 A0A087WTM6 91 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 BORCS7-ASMTA0A0B4J1R7 106 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 GCHFRP30047 84 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 NPC2P61916 151 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 SSBP1Q04837 148 aaKnown RBP-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 CLLU1Q5K131 121 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 FAM74A4Q5TZK3 123 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 SLC48A1Q6P1K1 146 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 Q6ZRX8 168 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 COX7B2Q8TF08 81 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 V9GYV3 84 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 CCDC171Q6TFL3 1326 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 ARHGAP31Q2M1Z3 1444 aa-0.48□□□□□ -2.49
PCNX1-208ENST00000554707 WDR97A6NE52 1622 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 MYO7AQ13402 2215 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 TNS1Q9HBL0 1735 aaKnown RBP-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 KIDINS220Q9ULH0 1771 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 CACNA1AO00555 2505 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 RBP4P02753 201 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 CCL3L1P16619 93 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 TOMM20LQ6UXN7 152 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 Q96NJ1 140 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 OVOS2A0A0G2JMS6 1433 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 ABCA2Q9BZC7 2435 aa-0.49□□□□□ -2.49
PCNX1-208ENST00000554707 TENM4Q6N022 2769 aa-0.5□□□□□ -2.49
PCNX1-208ENST00000554707 TRAV2A0A0B4J234 112 aa-0.5□□□□□ -2.49
PCNX1-208ENST00000554707 J3KT08 172 aa-0.5□□□□□ -2.49
PCNX1-208ENST00000554707 CMPK1P30085 196 aa-0.5□□□□□ -2.49
PCNX1-208ENST00000554707 SSBP3-AS1Q7Z2R9 100 aa-0.5□□□□□ -2.49
PCNX1-208ENST00000554707 ATP6V0E2Q8NHE4 81 aa-0.5□□□□□ -2.49
PCNX1-208ENST00000554707 ERG28Q9UKR5 140 aa-0.5□□□□□ -2.49
PCNX1-208ENST00000554707 TRGV1A0A0A0MS02 117 aa-0.51□□□□□ -2.49
PCNX1-208ENST00000554707 ZNF815PA8K554 130 aa-0.51□□□□□ -2.49
PCNX1-208ENST00000554707 HLA-DRB4P13762 266 aa-0.51□□□□□ -2.49
PCNX1-208ENST00000554707 UBE2DNLQ8IWF7 75 aa-0.51□□□□□ -2.49
PCNX1-208ENST00000554707 SMPXQ9UHP9 88 aa-0.51□□□□□ -2.49
PCNX1-208ENST00000554707 HLA-DRB4X5D2U9 266 aa-0.51□□□□□ -2.49
PCNX1-208ENST00000554707 CHD9Q3L8U1 2897 aa-0.51□□□□□ -2.49
PCNX1-208ENST00000554707 FER1L6Q2WGJ9 1857 aa-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 SSC5DA1L4H1 1573 aa-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 TMEM14DPA8MWL7 114 aa-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 TFAMQ00059 246 aaKnown RBP-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 SPCS2Q15005 226 aa-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 NDUFA11Q86Y39 141 aa-0.52□□□□□ -2.49
PCNX1-208ENST00000554707 SKA2Q8WVK7 121 aaPredicted RBP-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms