RNA–Protein interactions for RNA: ENST00000554590.5

FCF1-206, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-206ENST00000554590 TREM1Q9NP99 234 aa3.32□□□□□ -1.88
FCF1-206ENST00000554590 NAT8BQ9UHF3 227 aa3.32□□□□□ -1.88
FCF1-206ENST00000554590 TMEM189A5PLL7 270 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 DNASE2O00115 360 aaPredicted RBP3.31□□□□□ -1.88
FCF1-206ENST00000554590 PPP1R17O96001 155 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 P01737 135 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 APOC3P02656 99 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
FCF1-206ENST00000554590 APOC4P55056 127 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 CACNG7P62955 275 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 DEFB136Q30KP8 78 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 ZFP2Q6ZN57 461 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 ZNF738Q8NE65 137 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 ZC2HC1AQ96GY0 325 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 C9orf85Q96MD7 179 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 DERL1Q9BUN8 251 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 RPP21Q9H633 154 aaKnown RBP3.31□□□□□ -1.88
FCF1-206ENST00000554590 SRD5A3Q9H8P0 318 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 GSN-AS1Q9NRJ2 163 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 S4R3C0 116 aa3.31□□□□□ -1.88
FCF1-206ENST00000554590 IGHV3-35A0A0C4DH35 117 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 C7orf71A4D174 169 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 IZUMO1RA6ND01 250 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 LINC01546A6NGU7 62 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 H3BNG1 76 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 VCYO14598 125 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 TCAPO15273 167 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 SAP30O75446 220 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 HLA-DQA1P01909 254 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 S100PP25815 95 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 CAMPP49913 170 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 ELOBQ15370 118 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 KCNIP4Q6PIL6 250 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 RNASE8Q8TDE3 154 aaKnown RBP3.3□□□□□ -1.88
FCF1-206ENST00000554590 TMEM263Q8WUH6 116 aaKnown RBP3.3□□□□□ -1.88
FCF1-206ENST00000554590 BLNKQ8WV28 456 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 VGLL1Q99990 258 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 TMEM191AQ9H0A3 160 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 C11orf68Q9H3H3 251 aaKnown RBP3.3□□□□□ -1.88
FCF1-206ENST00000554590 NOTCH1P46531 2555 aa3.3□□□□□ -1.88
FCF1-206ENST00000554590 IGKV3D-20A0A0C4DH25 116 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 IGHV4-28A0A0C4DH34 117 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 TRBV6-5A0A0K0K1A5 114 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 A0A1B0GUT8 65 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 COLCA2A8K830 154 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 HIGD1CA8MV81 97 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 PRAC2D3DTV9 90 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 M0R381 172 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 INSP01308 110 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 ESDP10768 282 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 MIFP14174 115 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 TCL1AP56279 114 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 DEFB131AP59861 70 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 UBE2G2P60604 165 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 ERVFC1-1P60608 527 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 DEFA5Q01523 94 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 PSMG4Q5JS54 123 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 GFI1BQ5VTD9 330 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 Q71RC1 249 aaPredicted RBP3.29□□□□□ -1.88
FCF1-206ENST00000554590 NHLRC2Q8NBF2 726 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 GTSF1Q8WW33 167 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 FAM210BQ96KR6 192 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 OR5B12Q96R08 314 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 CSTL1Q9H114 145 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 U3KQK5 164 aa3.29□□□□□ -1.88
FCF1-206ENST00000554590 DNHD1Q96M86 4753 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 IGHV1OR15-1A0A075B7D0 117 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 IGKV2-40A0A087WW87 121 aaPredicted RBP3.28□□□□□ -1.88
FCF1-206ENST00000554590 LOC102724200A0A096LPH7 203 aaPredicted RBP3.28□□□□□ -1.88
FCF1-206ENST00000554590 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 TRBV10-1A0A0K0K1A3 114 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 LYRM9A8MSI8 78 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 A8MWV9 139 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 SH2D1AO60880 128 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 IGKV2D-40P01614 121 aaPredicted RBP3.28□□□□□ -1.88
FCF1-206ENST00000554590 GPX1P07203 203 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 ZNF688P0C7X2 276 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 RNASE3P12724 160 aaKnown RBP3.28□□□□□ -1.88
FCF1-206ENST00000554590 TFPI2P48307 235 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 AMTP48728 403 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 HBBP68871 147 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 SLAQ13239 276 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 UFSP1Q6NVU6 142 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 STHQ8IWL8 128 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 FAM24BQ8N5W8 94 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 RNF182Q8N6D2 247 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 C11orf72Q8NBR9 251 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 NUP35Q8NFH5 326 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 C16orf74Q96GX8 76 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 TM2D3Q9BRN9 247 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 NAGKQ9UJ70 344 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 GOLT1BQ9Y3E0 138 aa3.28□□□□□ -1.88
FCF1-206ENST00000554590 SORL1Q92673 2214 aa3.27□□□□□ -1.89
FCF1-206ENST00000554590 IGHV3-16A0A0C4DH30 117 aa3.27□□□□□ -1.89
FCF1-206ENST00000554590 hDV102S1A0JD36 115 aa3.27□□□□□ -1.89
FCF1-206ENST00000554590 PLAC8L1A1L4L8 177 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms