RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 ZNF688P0C7X2 276 aa12.95□□□□□ -0.34
PPP4R3A-202ENST00000554390 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
PPP4R3A-202ENST00000554390 TGFAP01135 160 aa12.94□□□□□ -0.34
PPP4R3A-202ENST00000554390 NEXN-AS1Q8NBZ9 246 aa12.94□□□□□ -0.34
PPP4R3A-202ENST00000554390 IGHV7-81A0A0B4J1V7 117 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 B5MCH6 92 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 SLC25A16P16260 332 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 TMEM219Q86XT9 240 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 A8MWV9 139 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 CD7P09564 240 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 VCX2Q9H322 139 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 IGHV7-4-1A0A0J9YVY3 117 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 SMIM2Q9BVW6 85 aa12.93□□□□□ -0.34
PPP4R3A-202ENST00000554390 ZANQ9Y493 2812 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 ANKRD29Q8N6D5 301 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 OR11H6Q8NGC7 330 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 RNF5Q99942 180 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 TCF15Q12870 199 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 LYRM7Q5U5X0 104 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 SPANXN1Q5VSR9 72 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 NDUFA11Q86Y39 141 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
PPP4R3A-202ENST00000554390 ATP6V0E1O15342 81 aa12.91□□□□□ -0.34
PPP4R3A-202ENST00000554390 NOTCH3Q9UM47 2321 aa12.91□□□□□ -0.34
PPP4R3A-202ENST00000554390 TOMM6Q96B49 74 aa12.91□□□□□ -0.34
PPP4R3A-202ENST00000554390 SBSPONQ8IVN8 264 aa12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 RASL10AQ92737 203 aa12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 POLQO75417 2590 aa12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 A0A1W2PPR1 153 aa12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 COX6B1P14854 86 aa12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 NPBQ8NG41 125 aa12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 BAALCQ8WXS3 180 aa12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 USP9YO00507 2555 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3A-202ENST00000554390 NHLRC4P0CG21 123 aaPredicted RBP12.9□□□□□ -0.35
PPP4R3A-202ENST00000554390 ORMDL2Q53FV1 153 aa12.9□□□□□ -0.35
PPP4R3A-202ENST00000554390 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.35
PPP4R3A-202ENST00000554390 TRBV20-1A0A075B6N2 111 aa12.89□□□□□ -0.35
PPP4R3A-202ENST00000554390 TMEM262E9PQX1 116 aa12.89□□□□□ -0.35
PPP4R3A-202ENST00000554390 ANXA2RQ3ZCQ2 193 aa12.89□□□□□ -0.35
PPP4R3A-202ENST00000554390 PRR9Q5T870 116 aa12.89□□□□□ -0.35
PPP4R3A-202ENST00000554390 M0R381 172 aa12.88□□□□□ -0.35
PPP4R3A-202ENST00000554390 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.88□□□□□ -0.35
PPP4R3A-202ENST00000554390 CITED1Q99966 193 aa12.88□□□□□ -0.35
PPP4R3A-202ENST00000554390 SCGB1C2P0DMR2 95 aa12.88□□□□□ -0.35
PPP4R3A-202ENST00000554390 Q8N9W7 124 aa12.88□□□□□ -0.35
PPP4R3A-202ENST00000554390 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
PPP4R3A-202ENST00000554390 PRTN3P24158 256 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 BUB3O43684 328 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 EMP1P54849 157 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 SUMO2P61956 95 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 C2orf66Q6UXQ4 117 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 TIMD4Q96H15 378 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 ODF3BA8MYP8 253 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 F6UB75 175 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 CFC1BP0CG36 223 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 CFC1P0CG37 223 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 CCDC140Q96MF4 163 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 HIF1ANQ9NWT6 349 aa12.87□□□□□ -0.35
PPP4R3A-202ENST00000554390 FLNCQ14315 2725 aa12.86□□□□□ -0.35
PPP4R3A-202ENST00000554390 A0A0J9YY99 117 aa12.86□□□□□ -0.35
PPP4R3A-202ENST00000554390 SLC50A1Q9BRV3 221 aa12.86□□□□□ -0.35
PPP4R3A-202ENST00000554390 ITPR1Q14643 2758 aa12.86□□□□□ -0.35
PPP4R3A-202ENST00000554390 CLPSL1A2RUU4 121 aa12.86□□□□□ -0.35
PPP4R3A-202ENST00000554390 RBAKDNA6NC62 111 aa12.86□□□□□ -0.35
PPP4R3A-202ENST00000554390 SRD5A1P18405 259 aa12.86□□□□□ -0.35
PPP4R3A-202ENST00000554390 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
PPP4R3A-202ENST00000554390 RPL39LQ96EH5 51 aaKnown RBP12.85□□□□□ -0.35
PPP4R3A-202ENST00000554390 AJUBAQ96IF1 538 aa12.85□□□□□ -0.35
PPP4R3A-202ENST00000554390 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
PPP4R3A-202ENST00000554390 C10orf126Q8N4M7 172 aa12.85□□□□□ -0.35
PPP4R3A-202ENST00000554390 ZFAND3Q9H8U3 227 aa12.85□□□□□ -0.35
PPP4R3A-202ENST00000554390 RHODO00212 210 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 RPL11P62913 178 aaKnown RBP12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 Q6ZS46 218 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 GAGE2BQ13066 116 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 GAGE2EQ4V326 116 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 GAGE2DQ9UEU5 116 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 SLC25A20O43772 301 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 SAA4P35542 130 aa12.84□□□□□ -0.35
PPP4R3A-202ENST00000554390 ABCA2Q9BZC7 2435 aa12.83□□□□□ -0.35
PPP4R3A-202ENST00000554390 CFAP161Q6P656 301 aa12.83□□□□□ -0.36
PPP4R3A-202ENST00000554390 TRAV4A0A0B4J268 109 aa12.83□□□□□ -0.36
PPP4R3A-202ENST00000554390 C9JAW5 83 aa12.83□□□□□ -0.36
PPP4R3A-202ENST00000554390 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
PPP4R3A-202ENST00000554390 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
PPP4R3A-202ENST00000554390 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
PPP4R3A-202ENST00000554390 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 NDUFV3P56181 108 aaKnown RBP12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 C20orf173Q96LM9 149 aa12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 CRLF1O75462 422 aa12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 CRYGDP07320 174 aa12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 BRD3OSQ6XYD6 125 aa12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 UBTD1Q9HAC8 227 aa12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 PRO1854Q9UHT4 67 aa12.82□□□□□ -0.36
PPP4R3A-202ENST00000554390 CCDC179H3BU77 68 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms