RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ATP5LO75964 103 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 HLA-DRB4P13762 266 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 MYOZ3Q8TDC0 251 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 SPXQ9BT56 116 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 HLA-DRB4X5D2U9 266 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 ABCA2Q9BZC7 2435 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 CTSGP08311 255 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 Q6ZQT7 251 aa6.95□□□□□ -1.3
AL049839.2-201ENST00000553947 CACNA1BQ00975 2339 aa6.94□□□□□ -1.3
AL049839.2-201ENST00000553947 ATP6V0E1O15342 81 aa6.94□□□□□ -1.3
AL049839.2-201ENST00000553947 ECSCRQ19T08 205 aa6.94□□□□□ -1.3
AL049839.2-201ENST00000553947 C5orf47Q569G3 176 aa6.94□□□□□ -1.3
AL049839.2-201ENST00000553947 G3V318 75 aa6.94□□□□□ -1.3
AL049839.2-201ENST00000553947 TCL1BO95988 128 aa6.94□□□□□ -1.3
AL049839.2-201ENST00000553947 CACNA1AO00555 2505 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 TRBV7-3A0A075B6L6 115 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 NPFFO15130 113 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 ZMAT4Q9H898 229 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 C9JAW5 83 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 ASIPP42127 132 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 CRIP1P50238 77 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 ZNF493Q6ZR52 646 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 C15orf53Q8NAA6 179 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 CSMD2Q7Z408 3487 aa6.93□□□□□ -1.3
AL049839.2-201ENST00000553947 IGHV4-61A0A0C4DH41 118 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 C15orf32Q32M92 178 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 TMEM219Q86XT9 240 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 OR10J6PQ8NGY7 276 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 SMAD5-AS1Q9Y6J3 95 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 SLC25A20O43772 301 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 BRD3OSQ6XYD6 125 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 TMEM75Q8N9X5 138 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 FAM110DQ8TAY7 271 aaPredicted RBP6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 C8orf49Q96NF6 230 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 U3KQK5 164 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 PAX8Q06710 450 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 CHCHD5Q9BSY4 110 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
AL049839.2-201ENST00000553947 IGSF10Q6WRI0 2623 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 TRBV6-1A0A0K0K1D8 114 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 H7C2G1 150 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 HLA-DMBP28068 263 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 TMEM78Q5T7P6 136 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 NXT2Q9NPJ8 142 aaKnown RBP6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 FLNCQ14315 2725 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 TRAV8-4A0A0B4J246 113 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 EMP1P54849 157 aa6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 NTN5Q8WTR8 489 aaPredicted RBP6.91□□□□□ -1.3
AL049839.2-201ENST00000553947 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 IGHG4P01861 327 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 C5orf56Q8N8D9 126 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 GATD1Q8NB37 220 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 KLK15Q9H2R5 256 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 LINC00527Q9UJ94 153 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 CELSR2Q9HCU4 2923 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 UTP20O75691 2785 aaKnown RBP6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 IGKV2-40A0A087WW87 121 aaPredicted RBP6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 GAS8-AS1O95177 125 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 IGKV2D-40P01614 121 aaPredicted RBP6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 LINC00694P0DN24 101 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 GATA1P15976 413 aaPredicted RBP6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 NRGNQ92686 78 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 CCL19Q99731 98 aa6.9□□□□□ -1.3
AL049839.2-201ENST00000553947 MAP1AP78559 2803 aaPredicted RBP6.9□□□□□ -1.31
AL049839.2-201ENST00000553947 LOC107984640A0A0U1RRK4 108 aa6.9□□□□□ -1.31
AL049839.2-201ENST00000553947 PLNP26678 52 aa6.9□□□□□ -1.31
AL049839.2-201ENST00000553947 PDE6HQ13956 83 aa6.9□□□□□ -1.31
AL049839.2-201ENST00000553947 ZFAND3Q9H8U3 227 aa6.9□□□□□ -1.31
AL049839.2-201ENST00000553947 CRYBG3Q68DQ2 2970 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 IGHV3-66A0A0C4DH42 116 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 IGHV4-38-2P0DP08 117 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 RPL7P18124 248 aaKnown RBP6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 UBE2D3P61077 147 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 UBE2D2P62837 147 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 CLEC19AQ6UXS0 136 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 IGHV3OR16-13A0A075B7E8 117 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 IGHV4-30-2A0A087WSY4 118 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 IGHV3-74A0A0B4J1X5 117 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 IGHV1-69DA0A0B4J2H0 117 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 IGHV1-69P01742 117 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 KLK9Q2XQG4 91 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 KLK9Q9UKQ9 250 aa6.89□□□□□ -1.31
AL049839.2-201ENST00000553947 SPG11Q96JI7 2443 aa6.88□□□□□ -1.31
AL049839.2-201ENST00000553947 USP9XQ93008 2570 aaPredicted RBP6.88□□□□□ -1.31
AL049839.2-201ENST00000553947 CLPSL1A2RUU4 121 aa6.88□□□□□ -1.31
AL049839.2-201ENST00000553947 LINC01559Q495D7 138 aa6.88□□□□□ -1.31
AL049839.2-201ENST00000553947 Q8TAT8 98 aa6.88□□□□□ -1.31
AL049839.2-201ENST00000553947 RASL10AQ92737 203 aa6.88□□□□□ -1.31
AL049839.2-201ENST00000553947 PIMREGQ9BSJ6 248 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 573.8 ms