RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SULT1A1P50225 295 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 ZNF80P51504 273 aaPredicted RBP5.7□□□□□ -1.5
PRKCH-208ENST00000553846 CNBPP62633 177 aaKnown RBP5.7□□□□□ -1.5
PRKCH-208ENST00000553846 RANP62826 216 aaKnown RBP5.7□□□□□ -1.5
PRKCH-208ENST00000553846 RPL19P84098 196 aaKnown RBP5.7□□□□□ -1.5
PRKCH-208ENST00000553846 IL15RAQ13261 267 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 SPACA4Q8TDM5 124 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 KCNS1Q96KK3 526 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 ATP5SQ99766 215 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 SH3BGRL3Q9H299 93 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 LYRM2Q9NU23 88 aaPredicted RBP5.7□□□□□ -1.5
PRKCH-208ENST00000553846 PLAC8Q9NZF1 115 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 GSKIPQ9P0R6 139 aa5.7□□□□□ -1.5
PRKCH-208ENST00000553846 A0A087WYN8 130 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 PHOX2AO14813 284 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 S100A11P31949 105 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 CSN1S1P47710 185 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 PRR3P79522 188 aaKnown RBP5.69□□□□□ -1.5
PRKCH-208ENST00000553846 Q0VG73 95 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 FFAR4Q5NUL3 377 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 PIK3CD-AS1Q5SR53 167 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 TRIQKQ629K1 86 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 WDR73Q6P4I2 378 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 TMEM252Q8N6L7 170 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 TMEM75Q8N9X5 138 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 HSD17B11Q8NBQ5 300 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 RNF185Q96GF1 192 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 C1orf43Q9BWL3 253 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
PRKCH-208ENST00000553846 CCSO14618 274 aa5.68□□□□□ -1.5
PRKCH-208ENST00000553846 SLPIP03973 132 aa5.68□□□□□ -1.5
PRKCH-208ENST00000553846 CHTF8P0CG12 524 aa5.68□□□□□ -1.5
PRKCH-208ENST00000553846 SPANXN2Q5MJ10 180 aa5.68□□□□□ -1.5
PRKCH-208ENST00000553846 OR10G7Q8NGN6 311 aa5.68□□□□□ -1.5
PRKCH-208ENST00000553846 ZC2HC1AQ96GY0 325 aa5.68□□□□□ -1.5
PRKCH-208ENST00000553846 JPT2Q9H910 190 aa5.68□□□□□ -1.5
PRKCH-208ENST00000553846 L7N2F9 121 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 BCAP31P51572 246 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 VAMP2P63027 116 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 UBE2L3P68036 154 aaKnown RBP5.67□□□□□ -1.5
PRKCH-208ENST00000553846 ELOBQ15370 118 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 GOLT1AQ6ZVE7 132 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 ARL6IP6Q8N6S5 226 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 OR2T35Q8NGX2 323 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 THAP6Q8TBB0 222 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 TREM1Q9NP99 234 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 OTORQ9NRC9 128 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 PRR34Q9NV39 138 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 LSM5Q9Y4Y9 91 aaKnown RBP5.67□□□□□ -1.5
PRKCH-208ENST00000553846 URGCP-MRPS24S4R325 110 aa5.67□□□□□ -1.5
PRKCH-208ENST00000553846 A0A087WX48 190 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 NAP1L6A6NFF2 107 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 A8MWV9 139 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 FAM25EA8MYX2 175 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 OR7C2O60412 319 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 FGF8P55075 233 aaPredicted RBP5.66□□□□□ -1.5
PRKCH-208ENST00000553846 HBG1P69891 147 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 HBG2P69892 147 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 ATP6V1FQ16864 119 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 MPV17L2Q567V2 206 aa5.66□□□□□ -1.5
PRKCH-208ENST00000553846 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.5
PRKCH-208ENST00000553846 CENPXA8MT69 81 aa5.65□□□□□ -1.5
PRKCH-208ENST00000553846 HLA-DQA1P01909 254 aa5.65□□□□□ -1.5
PRKCH-208ENST00000553846 UBE2D3P61077 147 aa5.65□□□□□ -1.5
PRKCH-208ENST00000553846 UBE2D2P62837 147 aa5.65□□□□□ -1.5
PRKCH-208ENST00000553846 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
PRKCH-208ENST00000553846 EIF3GO75821 320 aaKnown RBP eCLIP5.64□□□□□ -1.51
PRKCH-208ENST00000553846 S100A10P60903 97 aa5.64□□□□□ -1.51
PRKCH-208ENST00000553846 GNG5P63218 68 aa5.64□□□□□ -1.51
PRKCH-208ENST00000553846 NHLH2Q02577 135 aa5.64□□□□□ -1.51
PRKCH-208ENST00000553846 RAB32Q13637 225 aa5.64□□□□□ -1.51
PRKCH-208ENST00000553846 MIAQ16674 131 aa5.64□□□□□ -1.51
PRKCH-208ENST00000553846 STX12Q86Y82 276 aa5.64□□□□□ -1.51
PRKCH-208ENST00000553846 HYLS1Q96M11 299 aa5.64□□□□□ -1.51
PRKCH-208ENST00000553846 WDR61Q9GZS3 305 aaKnown RBP5.64□□□□□ -1.51
PRKCH-208ENST00000553846 TRAV6A0A075B6T7 132 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 TRBV6-8A0A0A6YYG3 113 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 MUC21A0A0G2JKD1 596 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 PGPA6NDG6 321 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 TAAR5O14804 337 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 IL7P13232 177 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 KHDC3LQ587J8 217 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 C15orf54Q8N8G6 183 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 CLRN3Q8NCR9 226 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 OR10G8Q8NGN5 311 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 OR5C1Q8NGR4 320 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 SDHCQ99643 169 aaPredicted RBP5.63□□□□□ -1.51
PRKCH-208ENST00000553846 IL36BQ9NZH7 164 aa5.63□□□□□ -1.51
PRKCH-208ENST00000553846 IGHV3-64A0A075B6Q5 118 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 TRBV10-1A0A0K0K1A3 114 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 RHODO00212 210 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 GCGP01275 180 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 OR2G3Q8NGZ4 309 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 SGK494Q96LW2 274 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 SEC22CQ9BRL7 303 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 RBM38Q9H0Z9 239 aaKnown RBP5.62□□□□□ -1.51
PRKCH-208ENST00000553846 DPH3P1Q9H4G8 78 aa5.62□□□□□ -1.51
PRKCH-208ENST00000553846 KCNIP2Q9NS61 270 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms