RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 S100A2P29034 98 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 RNASE4P34096 147 aaKnown RBP7.23□□□□□ -1.25
TMEM116-216ENST00000552800 DEFB131AP59861 70 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 DEFB1P60022 68 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 KIAA1644Q3SXP7 199 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 DYNLRB2Q8TF09 96 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 C9orf85Q96MD7 179 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 GSN-AS1Q9NRJ2 163 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 KIF25-AS1Q9Y6Z4 181 aa7.23□□□□□ -1.25
TMEM116-216ENST00000552800 MUC4Q99102 2169 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 GRIFINA4D1Z8 144 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 SERF1AO75920 110 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 LINC00614P0C842 121 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 KIR3DS1Q14943 382 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 TWIST1Q15672 202 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 ODF3L2Q3SX64 289 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
TMEM116-216ENST00000552800 KHDC1LQ5JSQ8 128 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 FAM159AQ6UWV7 190 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 Q6ZQT7 251 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 NIT1Q86X76 327 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 ORMDL3Q8N138 153 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
TMEM116-216ENST00000552800 FLNBO75369 2602 aaKnown RBP7.22□□□□□ -1.25
TMEM116-216ENST00000552800 IGHV1OR15-1A0A075B7D0 117 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 TMSB15BA0A087X1C1 80 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 IGHV3-16A0A0C4DH30 117 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 PRB4P10163 310 aaPredicted RBP7.21□□□□□ -1.26
TMEM116-216ENST00000552800 ASIPP42127 132 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 LINC00315P59091 139 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 PYY3Q5JQD4 70 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 TRPT1Q86TN4 253 aaKnown RBP7.21□□□□□ -1.26
TMEM116-216ENST00000552800 BAGE3Q86Y29 109 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 EDA2RQ9HAV5 297 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 MSRB1Q9NZV6 116 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 F8P00451 2351 aa7.21□□□□□ -1.26
TMEM116-216ENST00000552800 WNK1Q9H4A3 2382 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 RBMY1BA6NDE4 496 aaKnown RBP7.2□□□□□ -1.26
TMEM116-216ENST00000552800 RBMY1EA6NEQ0 496 aaKnown RBP7.2□□□□□ -1.26
TMEM116-216ENST00000552800 K7EMI3 77 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 M0R381 172 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 GNRH2O43555 120 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 RBMY1DP0C7P1 496 aaKnown RBP7.2□□□□□ -1.26
TMEM116-216ENST00000552800 FABP4P15090 132 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 TFPI2P48307 235 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 RPL32P62910 135 aaKnown RBP7.2□□□□□ -1.26
TMEM116-216ENST00000552800 OR10D4PQ8NGN7 298 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 OR10AG1Q8NH19 301 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 MRAP2Q96G30 205 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 RCHY1Q96PM5 261 aa7.2□□□□□ -1.26
TMEM116-216ENST00000552800 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
TMEM116-216ENST00000552800 TRGV11A0A075B6L2 103 aa7.19□□□□□ -1.26
TMEM116-216ENST00000552800 OR11H12B2RN74 326 aa7.19□□□□□ -1.26
TMEM116-216ENST00000552800 PPP1R17O96001 155 aa7.19□□□□□ -1.26
TMEM116-216ENST00000552800 SMIM15Q7Z3B0 74 aa7.19□□□□□ -1.26
TMEM116-216ENST00000552800 AMN1Q8IY45 258 aa7.19□□□□□ -1.26
TMEM116-216ENST00000552800 C11orf44Q8N8P7 122 aa7.19□□□□□ -1.26
TMEM116-216ENST00000552800 IGLV2-18A0A075B6J9 118 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 TRAV12-3A0A0B4J271 114 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 A0A1W2PRX2 142 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 AKR1D1P51857 326 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 SPINK13Q1W4C9 94 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 SPANXN1Q5VSR9 72 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 Q8N1Y9 231 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.18□□□□□ -1.26
TMEM116-216ENST00000552800 NRACQ8N912 160 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 C12orf57Q99622 126 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 C20orf78Q9BR46 151 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 MCRIP2Q9BUT9 160 aaKnown RBP7.18□□□□□ -1.26
TMEM116-216ENST00000552800 DPH3P1Q9H4G8 78 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 PHLDA3Q9Y5J5 127 aa7.18□□□□□ -1.26
TMEM116-216ENST00000552800 SETD2Q9BYW2 2564 aaPredicted RBP7.18□□□□□ -1.26
TMEM116-216ENST00000552800 KNCNA6PVL3 124 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 D6R8Y8 96 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 H3BVH4 76 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
TMEM116-216ENST00000552800 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 EVI2AP22794 236 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 S100A4P26447 101 aaKnown RBP7.17□□□□□ -1.26
TMEM116-216ENST00000552800 CKS2P33552 79 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 NUTF2P61970 127 aaKnown RBP7.17□□□□□ -1.26
TMEM116-216ENST00000552800 S100A12P80511 92 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
TMEM116-216ENST00000552800 C9orf66Q5T8R8 295 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 MORN3Q6PF18 240 aaPredicted RBP7.17□□□□□ -1.26
TMEM116-216ENST00000552800 SPATA12Q7Z6I5 190 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 SPXQ9BT56 116 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 ZNF747Q9BV97 191 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 TPPP3Q9BW30 176 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 NAGKQ9UJ70 344 aa7.17□□□□□ -1.26
TMEM116-216ENST00000552800 TRBV6-5A0A0K0K1A5 114 aa7.16□□□□□ -1.26
TMEM116-216ENST00000552800 M0R2Z0 102 aa7.16□□□□□ -1.26
TMEM116-216ENST00000552800 SAP30O75446 220 aa7.16□□□□□ -1.26
TMEM116-216ENST00000552800 CRYGDP07320 174 aa7.16□□□□□ -1.26
TMEM116-216ENST00000552800 CD7P09564 240 aa7.16□□□□□ -1.26
TMEM116-216ENST00000552800 GIG44P09565 113 aaPredicted RBP7.16□□□□□ -1.26
TMEM116-216ENST00000552800 NSUN5P1Q3KNT7 163 aa7.16□□□□□ -1.26
TMEM116-216ENST00000552800 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
TMEM116-216ENST00000552800 Q6ZWC4 215 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms