RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SKA2Q8WVK7 121 aaPredicted RBP-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 TMEM141Q96I45 108 aa-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 PRR15LQ9BU68 103 aa-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 BET1LQ9NYM9 111 aa-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 TAS2R8Q9NYW2 309 aa-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 HIVEP3Q5T1R4 2406 aa-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 KDM5CP41229 1560 aa-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 LAMC3Q9Y6N6 1575 aa-0.15□□□□□ -2.43
SCAF11-215ENST00000551391 UHRF1BP1LA0JNW5 1464 aa-0.16□□□□□ -2.43
SCAF11-215ENST00000551391 CDK13Q14004 1512 aaKnown RBP-0.16□□□□□ -2.43
SCAF11-215ENST00000551391 C9JAW5 83 aa-0.16□□□□□ -2.44
SCAF11-215ENST00000551391 OR8I2Q8N0Y5 310 aa-0.16□□□□□ -2.44
SCAF11-215ENST00000551391 SLC35B3Q9H1N7 401 aa-0.16□□□□□ -2.44
SCAF11-215ENST00000551391 SOGA1O94964 1423 aa-0.16□□□□□ -2.44
SCAF11-215ENST00000551391 TNS1Q9HBL0 1735 aaKnown RBP-0.16□□□□□ -2.44
SCAF11-215ENST00000551391 CCDC171Q6TFL3 1326 aa-0.16□□□□□ -2.44
SCAF11-215ENST00000551391 PLXNA2O75051 1894 aa-0.17□□□□□ -2.44
SCAF11-215ENST00000551391 TMEM91Q6ZNR0 172 aa-0.17□□□□□ -2.44
SCAF11-215ENST00000551391 SLC25A26Q70HW3 274 aa-0.17□□□□□ -2.44
SCAF11-215ENST00000551391 HELZP42694 1942 aaKnown RBP-0.17□□□□□ -2.44
SCAF11-215ENST00000551391 XIRP1Q702N8 1843 aaKnown RBP-0.17□□□□□ -2.44
SCAF11-215ENST00000551391 ZNF142P52746 1687 aaPredicted RBP-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 ABCA4P78363 2273 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 TRAV17A0A0B4J275 112 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 A0A1B0GX51 115 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 F2Z2F3 143 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 ELOF1P60002 83 aaKnown RBP-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 SMIM15Q7Z3B0 74 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 NDUFA11Q86Y39 141 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 BPESC1Q9GZL8 116 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 ARAP1Q96P48 1450 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 UNC79Q9P2D8 2635 aa-0.18□□□□□ -2.44
SCAF11-215ENST00000551391 TRAV36DV7A0A075B6V5 113 aa-0.19□□□□□ -2.44
SCAF11-215ENST00000551391 ZNF670-ZNF695F2Z2N8 137 aa-0.19□□□□□ -2.44
SCAF11-215ENST00000551391 TSTD3H0UI37 97 aa-0.19□□□□□ -2.44
SCAF11-215ENST00000551391 DNAJC15Q9Y5T4 150 aa-0.19□□□□□ -2.44
SCAF11-215ENST00000551391 ASXL3Q9C0F0 2248 aa-0.19□□□□□ -2.44
SCAF11-215ENST00000551391 CELSR2Q9HCU4 2923 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 A0A1B0GW64 132 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 PAEPP09466 180 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 SCTP09683 121 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 OR2T2Q6IF00 324 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 CALML5Q9NZT1 146 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 GINS2Q9Y248 185 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 HSPB11Q9Y547 144 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 CACNA1CQ13936 2221 aa-0.2□□□□□ -2.44
SCAF11-215ENST00000551391 VIRMAQ69YN4 1812 aaKnown RBP-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 HLA-DRB4P13762 266 aa-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 COX6A2Q02221 97 aa-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 OR8B8Q15620 311 aa-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 ATP6V0E2Q8NHE4 81 aa-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 MAGOHBQ96A72 148 aaKnown RBP-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 HLA-DRB4X5D2U9 266 aa-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 MYO7AQ13402 2215 aa-0.21□□□□□ -2.44
SCAF11-215ENST00000551391 PTPRMP28827 1452 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 CELSR1Q9NYQ6 3014 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 GVQW2A0A096LPI5 108 aaPredicted RBP-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 TCRBV3S1A0A5B6 114 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 RBAKDNA6NC62 111 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 SMIM24O75264 130 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 MT-ND4LP03901 98 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 NEFHP12036 1026 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 SNX29P2Q8IUI4 249 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 DYNLRB2Q8TF09 96 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 BANF2Q9H503 90 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 F8P00451 2351 aa-0.22□□□□□ -2.44
SCAF11-215ENST00000551391 CASZ1Q86V15 1759 aa-0.22□□□□□ -2.45
SCAF11-215ENST00000551391 MED13LQ71F56 2210 aa-0.22□□□□□ -2.45
SCAF11-215ENST00000551391 DEGS1O15121 323 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 YPEL1O60688 119 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 TNFSF15O95150 251 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 RBP4P02753 201 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 TFF1P04155 84 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 NBEAP1P0C6P0 100 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 SLC25A6P12236 298 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 FAM213BQ8TBF2 198 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 SMIM11BQ8TCY0 68 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 SPANXCQ9NY87 97 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 ERG28Q9UKR5 140 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 NOP16Q9Y3C1 178 aaKnown RBP-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 U3KQA8 63 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 F5P12259 2224 aa-0.23□□□□□ -2.45
SCAF11-215ENST00000551391 UBR5O95071 2799 aaPredicted RBP-0.24□□□□□ -2.45
SCAF11-215ENST00000551391 A0A087WTM6 91 aa-0.24□□□□□ -2.45
SCAF11-215ENST00000551391 TMEM244Q5VVB8 128 aa-0.24□□□□□ -2.45
SCAF11-215ENST00000551391 ATP11AUNQ6ZP68 121 aa-0.24□□□□□ -2.45
SCAF11-215ENST00000551391 CYP2G1PQ6ZSU1 146 aa-0.24□□□□□ -2.45
SCAF11-215ENST00000551391 TCTE3Q8IZS6 198 aa-0.24□□□□□ -2.45
SCAF11-215ENST00000551391 SELENOSQ9BQE4 189 aa-0.24□□□□□ -2.45
SCAF11-215ENST00000551391 BORCS7-ASMTA0A0B4J1R7 106 aa-0.25□□□□□ -2.45
SCAF11-215ENST00000551391 CCL3L1P16619 93 aa-0.25□□□□□ -2.45
SCAF11-215ENST00000551391 SPANXA1Q9NS26 97 aa-0.25□□□□□ -2.45
SCAF11-215ENST00000551391 HIGD1AQ9Y241 93 aa-0.25□□□□□ -2.45
SCAF11-215ENST00000551391 SSC5DA1L4H1 1573 aa-0.25□□□□□ -2.45
SCAF11-215ENST00000551391 PLXNA1Q9UIW2 1896 aa-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 GNG14A0A1W2PPG7 69 aa-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 CCDC179H3BU77 68 aa-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 NMBP08949 121 aa-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 COX4I1P13073 169 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms