RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 C9orf85Q96MD7 179 aa12.06□□□□□ -0.48
RPAP3-207ENST00000551293 KCNIP2Q9NS61 270 aa12.06□□□□□ -0.48
RPAP3-207ENST00000551293 OR5AC2Q9NZP5 309 aa12.06□□□□□ -0.48
RPAP3-207ENST00000551293 LRP2P98164 4655 aa12.05□□□□□ -0.48
RPAP3-207ENST00000551293 C17orf112F2Z3M2 114 aa12.05□□□□□ -0.48
RPAP3-207ENST00000551293 LYRM1O43325 122 aa12.05□□□□□ -0.48
RPAP3-207ENST00000551293 SIX6O95475 246 aa12.05□□□□□ -0.48
RPAP3-207ENST00000551293 IGLV2-11P01706 119 aa12.05□□□□□ -0.48
RPAP3-207ENST00000551293 MT1HL1P0DM35 61 aa12.05□□□□□ -0.48
RPAP3-207ENST00000551293 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
RPAP3-207ENST00000551293 CIDEAO60543 219 aa12.04□□□□□ -0.48
RPAP3-207ENST00000551293 LINC00694P0DN24 101 aa12.04□□□□□ -0.48
RPAP3-207ENST00000551293 C14orf178Q8N769 122 aaPredicted RBP12.04□□□□□ -0.48
RPAP3-207ENST00000551293 CYB561D1Q8N8Q1 229 aa12.04□□□□□ -0.48
RPAP3-207ENST00000551293 PARLQ9H300 379 aa12.04□□□□□ -0.48
RPAP3-207ENST00000551293 HMGB3O15347 200 aaKnown RBP12.03□□□□□ -0.48
RPAP3-207ENST00000551293 FAM74A1Q5RGS3 127 aa12.03□□□□□ -0.48
RPAP3-207ENST00000551293 JPT2Q9H910 190 aa12.03□□□□□ -0.48
RPAP3-207ENST00000551293 GCGP01275 180 aa12.02□□□□□ -0.49
RPAP3-207ENST00000551293 H2AFB2P0C5Z0 115 aa12.02□□□□□ -0.49
RPAP3-207ENST00000551293 RNASE3P12724 160 aaKnown RBP12.02□□□□□ -0.49
RPAP3-207ENST00000551293 TAS2R45P59539 299 aa12.02□□□□□ -0.49
RPAP3-207ENST00000551293 LGALSLQ3ZCW2 172 aaPredicted RBP12.02□□□□□ -0.49
RPAP3-207ENST00000551293 NIT1Q86X76 327 aa12.02□□□□□ -0.49
RPAP3-207ENST00000551293 H0YIZ8 118 aa12.01□□□□□ -0.49
RPAP3-207ENST00000551293 NDFIP1Q9BT67 221 aa12.01□□□□□ -0.49
RPAP3-207ENST00000551293 SMIM3Q9BZL3 60 aa12.01□□□□□ -0.49
RPAP3-207ENST00000551293 A0A087WWC5 75 aa12□□□□□ -0.49
RPAP3-207ENST00000551293 TAAR5O14804 337 aa12□□□□□ -0.49
RPAP3-207ENST00000551293 SH3BGRL3Q9H299 93 aa12□□□□□ -0.49
RPAP3-207ENST00000551293 RBM38Q9H0Z9 239 aaKnown RBP11.99□□□□□ -0.49
RPAP3-207ENST00000551293 A0A087WX48 190 aa11.98□□□□□ -0.49
RPAP3-207ENST00000551293 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.98□□□□□ -0.49
RPAP3-207ENST00000551293 TNXBP22105 4242 aa11.97□□□□□ -0.49
RPAP3-207ENST00000551293 PANO1I0J062 215 aa11.97□□□□□ -0.49
RPAP3-207ENST00000551293 ZFP2Q6ZN57 461 aa11.97□□□□□ -0.49
RPAP3-207ENST00000551293 PRNTQ86SH4 94 aa11.97□□□□□ -0.49
RPAP3-207ENST00000551293 PTH2Q96A98 100 aa11.97□□□□□ -0.49
RPAP3-207ENST00000551293 LINC00479Q96M42 142 aa11.97□□□□□ -0.49
RPAP3-207ENST00000551293 PSG8Q9UQ74 426 aa11.97□□□□□ -0.49
RPAP3-207ENST00000551293 A8MWV9 139 aa11.96□□□□□ -0.49
RPAP3-207ENST00000551293 S100A4P26447 101 aaKnown RBP11.96□□□□□ -0.49
RPAP3-207ENST00000551293 FGF8P55075 233 aaPredicted RBP11.96□□□□□ -0.49
RPAP3-207ENST00000551293 RAB2AP61019 212 aa11.96□□□□□ -0.49
RPAP3-207ENST00000551293 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
RPAP3-207ENST00000551293 SCGB1C1Q8TD33 95 aa11.96□□□□□ -0.49
RPAP3-207ENST00000551293 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
RPAP3-207ENST00000551293 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.49
RPAP3-207ENST00000551293 A0A1W2PPV4 95 aa11.95□□□□□ -0.5
RPAP3-207ENST00000551293 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
RPAP3-207ENST00000551293 ASIPP42127 132 aa11.95□□□□□ -0.5
RPAP3-207ENST00000551293 SMUG1Q53HV7 270 aa11.95□□□□□ -0.5
RPAP3-207ENST00000551293 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
RPAP3-207ENST00000551293 UFSP1Q6NVU6 142 aa11.95□□□□□ -0.5
RPAP3-207ENST00000551293 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
RPAP3-207ENST00000551293 IGKV3D-20A0A0C4DH25 116 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 TCRAP04437 139 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 SEC11BP0C7V7 166 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 ODF1Q14990 250 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 C14orf177Q52M58 125 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 KCNIP4Q6PIL6 250 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
RPAP3-207ENST00000551293 A0A087WWL8 130 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 FAM240BA0A1B0GVZ2 78 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 PRSS1P07477 247 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 ARL14EPLP0DKL9 152 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 ZFP69Q49AA0 526 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 ATRAIDQ6UW56 229 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 ENHOQ6UWT2 76 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 PQLC2Q6ZP29 291 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 ARL6IP6Q8N6S5 226 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 C15orf54Q8N8G6 183 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 HSPB11Q9Y547 144 aa11.93□□□□□ -0.5
RPAP3-207ENST00000551293 H3BVH4 76 aa11.92□□□□□ -0.5
RPAP3-207ENST00000551293 FLI1Q01543 452 aaPredicted RBP11.92□□□□□ -0.5
RPAP3-207ENST00000551293 ELOBQ15370 118 aa11.92□□□□□ -0.5
RPAP3-207ENST00000551293 WFDC1Q9HC57 220 aa11.92□□□□□ -0.5
RPAP3-207ENST00000551293 Q0VG73 95 aa11.91□□□□□ -0.5
RPAP3-207ENST00000551293 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
RPAP3-207ENST00000551293 K7EQM0 130 aa11.9□□□□□ -0.5
RPAP3-207ENST00000551293 CRPP02741 224 aa11.9□□□□□ -0.5
RPAP3-207ENST00000551293 Q6ZRU5 148 aa11.9□□□□□ -0.5
RPAP3-207ENST00000551293 OR10G9Q8NGN4 311 aa11.9□□□□□ -0.5
RPAP3-207ENST00000551293 OR10G7Q8NGN6 311 aa11.9□□□□□ -0.5
RPAP3-207ENST00000551293 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
RPAP3-207ENST00000551293 SUMO1P63165 101 aaKnown RBP11.89□□□□□ -0.51
RPAP3-207ENST00000551293 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
RPAP3-207ENST00000551293 ZC2HC1AQ96GY0 325 aa11.89□□□□□ -0.51
RPAP3-207ENST00000551293 SERTM2A0A1B0GWG4 89 aa11.88□□□□□ -0.51
RPAP3-207ENST00000551293 GRIFINA4D1Z8 144 aa11.88□□□□□ -0.51
RPAP3-207ENST00000551293 M0R036 132 aa11.88□□□□□ -0.51
RPAP3-207ENST00000551293 ANGP03950 147 aaKnown RBP11.88□□□□□ -0.51
RPAP3-207ENST00000551293 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
RPAP3-207ENST00000551293 CLPSL2Q6UWE3 100 aa11.88□□□□□ -0.51
RPAP3-207ENST00000551293 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
RPAP3-207ENST00000551293 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
RPAP3-207ENST00000551293 H2BFSP57053 126 aa11.87□□□□□ -0.51
RPAP3-207ENST00000551293 C9orf163Q8N9P6 203 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms