RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 TSPOP30536 169 aa11.04□□□□□ -0.64
TCHP-208ENST00000549550 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
TCHP-208ENST00000549550 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
TCHP-208ENST00000549550 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
TCHP-208ENST00000549550 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.04□□□□□ -0.64
TCHP-208ENST00000549550 URGCP-MRPS24S4R325 110 aa11.04□□□□□ -0.64
TCHP-208ENST00000549550 A0A0J9YX75 114 aa11.03□□□□□ -0.64
TCHP-208ENST00000549550 A0A1W2PPQ1 181 aa11.03□□□□□ -0.64
TCHP-208ENST00000549550 LEPP41159 167 aa11.03□□□□□ -0.64
TCHP-208ENST00000549550 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
TCHP-208ENST00000549550 C1orf134Q5TEV5 83 aa11.03□□□□□ -0.64
TCHP-208ENST00000549550 XCL2Q9UBD3 114 aa11.03□□□□□ -0.64
TCHP-208ENST00000549550 A0A1B0GW15 77 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 A8MTW9 85 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 MT-ND6P03923 174 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 ERCC8Q13216 396 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 WDR73Q6P4I2 378 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 OR2D3Q8NGH3 330 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 Q8TAT8 98 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 C8orf49Q96NF6 230 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
TCHP-208ENST00000549550 TGIF2-C20orf24A0A0A6YYL0 155 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 TRAV21A0A0B4J279 112 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 C16orf90A8MZG2 172 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 C1orf196B1AJZ1 125 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 SH2D1AO60880 128 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 SPART-AS1P0CW21 52 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 EMP1P54849 157 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 NUTF2P61970 127 aaKnown RBP11.01□□□□□ -0.65
TCHP-208ENST00000549550 LINC01559Q495D7 138 aa11.01□□□□□ -0.65
TCHP-208ENST00000549550 TMEM189A5PLL7 270 aa11□□□□□ -0.65
TCHP-208ENST00000549550 KLLNB2CW77 178 aa11□□□□□ -0.65
TCHP-208ENST00000549550 S100A8P05109 93 aa11□□□□□ -0.65
TCHP-208ENST00000549550 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
TCHP-208ENST00000549550 CRIP1P50238 77 aa11□□□□□ -0.65
TCHP-208ENST00000549550 RAB5BP61020 215 aa11□□□□□ -0.65
TCHP-208ENST00000549550 GPX1P07203 203 aa10.99□□□□□ -0.65
TCHP-208ENST00000549550 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
TCHP-208ENST00000549550 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
TCHP-208ENST00000549550 ZFAND2AQ8N6M9 145 aa10.99□□□□□ -0.65
TCHP-208ENST00000549550 NEU1Q99519 415 aa10.99□□□□□ -0.65
TCHP-208ENST00000549550 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
TCHP-208ENST00000549550 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
TCHP-208ENST00000549550 HIGD1CA8MV81 97 aa10.98□□□□□ -0.65
TCHP-208ENST00000549550 H3BMM0 161 aa10.98□□□□□ -0.65
TCHP-208ENST00000549550 TNP2Q05952 138 aa10.98□□□□□ -0.65
TCHP-208ENST00000549550 BORCS7Q96B45 105 aa10.98□□□□□ -0.65
TCHP-208ENST00000549550 F2Z2F3 143 aa10.97□□□□□ -0.65
TCHP-208ENST00000549550 ZNF705DP0CH99 300 aaPredicted RBP10.97□□□□□ -0.65
TCHP-208ENST00000549550 ZNF705BP0CI00 300 aaPredicted RBP10.97□□□□□ -0.65
TCHP-208ENST00000549550 HTN3P15516 51 aa10.97□□□□□ -0.65
TCHP-208ENST00000549550 NUP35Q8NFH5 326 aa10.97□□□□□ -0.65
TCHP-208ENST00000549550 KCNS1Q96KK3 526 aa10.97□□□□□ -0.65
TCHP-208ENST00000549550 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
TCHP-208ENST00000549550 DKK2Q9UBU2 259 aa10.97□□□□□ -0.65
TCHP-208ENST00000549550 LRP1BQ9NZR2 4599 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 SMIM9A6NGZ8 99 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 HLA-DQA1P01909 254 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 ORM1P02763 201 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 CDKN1BP46527 198 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 ZNF80P51504 273 aaPredicted RBP10.96□□□□□ -0.65
TCHP-208ENST00000549550 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.65
TCHP-208ENST00000549550 A0A1B0GUT8 65 aa10.95□□□□□ -0.66
TCHP-208ENST00000549550 F6UB75 175 aa10.95□□□□□ -0.66
TCHP-208ENST00000549550 CTRLP40313 264 aa10.95□□□□□ -0.66
TCHP-208ENST00000549550 RIGQ13278 110 aa10.95□□□□□ -0.66
TCHP-208ENST00000549550 Q8N1X5 172 aa10.95□□□□□ -0.66
TCHP-208ENST00000549550 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 C7orf71A4D174 169 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 IGLC6P0CF74 106 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 TCL1AP56279 114 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 FXYD7P58549 80 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 HBBP68871 147 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 TDRG1Q3Y452 100 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 AMTNQ6UX39 209 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 GTSF1Q8WW33 167 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 CNFNQ9BYD5 112 aa10.94□□□□□ -0.66
TCHP-208ENST00000549550 HERC1Q15751 4861 aa10.93□□□□□ -0.66
TCHP-208ENST00000549550 A0A1B0GXF2 115 aa10.93□□□□□ -0.66
TCHP-208ENST00000549550 IGKV3-20P01619 116 aa10.93□□□□□ -0.66
TCHP-208ENST00000549550 GDF5OSQ5U4N7 250 aa10.93□□□□□ -0.66
TCHP-208ENST00000549550 FER1L6-AS1Q8NA97 138 aa10.93□□□□□ -0.66
TCHP-208ENST00000549550 GATD1Q8NB37 220 aa10.93□□□□□ -0.66
TCHP-208ENST00000549550 TRAPPC1Q9Y5R8 145 aa10.93□□□□□ -0.66
TCHP-208ENST00000549550 OR5AL1P0C617 328 aa10.92□□□□□ -0.66
TCHP-208ENST00000549550 DEFB1P60022 68 aa10.92□□□□□ -0.66
TCHP-208ENST00000549550 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
TCHP-208ENST00000549550 APOBP04114 4563 aaKnown RBP10.92□□□□□ -0.66
TCHP-208ENST00000549550 TRGC2P03986 189 aa10.91□□□□□ -0.66
TCHP-208ENST00000549550 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
TCHP-208ENST00000549550 CACNG7P62955 275 aa10.91□□□□□ -0.66
TCHP-208ENST00000549550 FAM159AQ6UWV7 190 aa10.91□□□□□ -0.66
TCHP-208ENST00000549550 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
TCHP-208ENST00000549550 LINC00467Q9BRT7 94 aa10.91□□□□□ -0.66
TCHP-208ENST00000549550 SSBP4Q9BWG4 385 aaPredicted RBP10.91□□□□□ -0.66
TCHP-208ENST00000549550 TMA7Q9Y2S6 64 aaKnown RBP10.91□□□□□ -0.66
TCHP-208ENST00000549550 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms