RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 RAB5BP61020 215 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 HBBP68871 147 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 RIGQ13278 110 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 RARRES2Q99969 163 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 NXT2Q9NPJ8 142 aaKnown RBP3.45□□□□□ -1.86
SCAF11-212ENST00000549162 HIGD1BQ9P298 99 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 URGCP-MRPS24S4R325 110 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 DNAH14Q0VDD8 3507 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 ORM1P02763 201 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 SMIM6P0DI80 62 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 IZUMO4Q1ZYL8 232 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 HILPDAQ9Y5L2 63 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 LAMA2P24043 3122 aaKnown RBP3.45□□□□□ -1.86
SCAF11-212ENST00000549162 ZDBF2Q9HCK1 2354 aa3.45□□□□□ -1.86
SCAF11-212ENST00000549162 INSP01308 110 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 GPX1P07203 203 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 CIRBPQ14011 172 aaKnown RBP3.44□□□□□ -1.86
SCAF11-212ENST00000549162 TCF24Q7RTU0 167 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 NUP35Q8NFH5 326 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 SMIM2Q9BVW6 85 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 NAGKQ9UJ70 344 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 DNAH11Q96DT5 4516 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 ATRXP46100 2492 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 KIAA2026Q5HYC2 2103 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 A0A087WZ39 114 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 A0A1B0GWB2 263 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 TRGC1P0CF51 173 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 RBMY1A1P0DJD3 496 aaKnown RBP3.44□□□□□ -1.86
SCAF11-212ENST00000549162 RBMY1CP0DJD4 496 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 EVI2AP22794 236 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 ERCC8Q13216 396 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 RBMY1FQ15415 496 aaKnown RBP3.44□□□□□ -1.86
SCAF11-212ENST00000549162 GDF5OSQ5U4N7 250 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 DAZ4Q86SG3 579 aaKnown RBP3.44□□□□□ -1.86
SCAF11-212ENST00000549162 LINC00476Q8WZB0 136 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 DAZ3Q9NR90 486 aaKnown RBP3.44□□□□□ -1.86
SCAF11-212ENST00000549162 RBM7Q9Y580 266 aaKnown RBP3.44□□□□□ -1.86
SCAF11-212ENST00000549162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.44□□□□□ -1.863e-6■■■■■ 34.6
SCAF11-212ENST00000549162 CHD8Q9HCK8 2581 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 A0A096LNJ9 63 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 TRBV12-3P01733 135 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 HLA-DMBP28068 263 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 PRR9Q5T870 116 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 OR2D3Q8NGH3 330 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 SPANXA1Q9NS26 97 aa3.44□□□□□ -1.86
SCAF11-212ENST00000549162 GAGE12JA6NER3 117 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 M0QY20 66 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 FRMD6-AS1P0C7T7 363 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 ZNF80P51504 273 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-212ENST00000549162 UBE2D3P61077 147 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 UBE2D2P62837 147 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 BAGE2Q86Y30 109 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 OR10AG1Q8NH19 301 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 PKD1P98161 4303 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 ANKRD11Q6UB99 2663 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-212ENST00000549162 IGIPA6NJ69 53 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 AMMECR1LQ6DCA0 310 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 C15orf53Q8NAA6 179 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 PMCHL2Q9BQD1 86 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 DPH3P1Q9H4G8 78 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 RETNQ9HD89 108 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 SPANXB1Q9NS25 103 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-212ENST00000549162 MDFIC2A0A1B0GVS7 189 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 CNIH1O95406 144 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 FABP9Q0Z7S8 132 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 CLEC19AQ6UXS0 136 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-212ENST00000549162 SFT2D1Q8WV19 159 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 TP73-AS1Q9UF72 201 aa3.43□□□□□ -1.86
SCAF11-212ENST00000549162 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 A0A1B0GUT8 65 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 FAM181BA6NEQ2 426 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 OR2T8A6NH00 312 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 TAL2Q16559 108 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 Q56UQ5 140 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 GCSAMLQ5JQS6 135 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 HIST3H2BBQ8N257 126 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 PKIGQ9Y2B9 76 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 OTOGQ6ZRI0 2925 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 GPR183P32249 361 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 C5orf47Q569G3 176 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 Q6ZVH6 145 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 Q6ZVQ6 151 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 ZFHX2Q9C0A1 2572 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-212ENST00000549162 IGHV4-30-4P0DP06 118 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 RANP62826 216 aaKnown RBP3.42□□□□□ -1.86
SCAF11-212ENST00000549162 GFI1BQ5VTD9 330 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 BRD3OSQ6XYD6 125 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 BAALCQ8WXS3 180 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 SMIM7Q9BQ49 75 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 SLC25A22Q9H936 323 aa3.42□□□□□ -1.86
SCAF11-212ENST00000549162 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
SCAF11-212ENST00000549162 FAM208BQ5VWN6 2430 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 ZNF727A8MUV8 499 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 H3BSH0 61 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 LINC00526Q96FQ7 95 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 AURKAIP1Q9NWT8 199 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-212ENST00000549162 TRAV5A0A0B4J249 113 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 MGST1P10620 155 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms