RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 IGHV3-30-5P0DP03 117 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 CD28P10747 220 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 CRIP2P52943 208 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-203ENST00000545354 FBXL19-AS1Q494R0 122 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 FAM72AQ5TYM5 149 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 FAM72DQ6L9T8 149 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 WFDC5Q8TCV5 224 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 SMCR5Q8TEV8 140 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 TMEM263Q8WUH6 116 aaKnown RBP3.83□□□□□ -1.8
UBE4A-203ENST00000545354 C1orf147Q96MC9 270 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-203ENST00000545354 PTPRBP23467 1997 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 TRPM6Q9BX84 2022 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 PTPRZ1P23471 2315 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-203ENST00000545354 DMXL1Q9Y485 3027 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 KMT2BQ9UMN6 2715 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-203ENST00000545354 IGKV1D-43A0A0B4J1Z2 117 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 TRAV40A0A0B4J280 105 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-203ENST00000545354 CCL22O00626 93 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 IGKV1-5P01602 117 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 IAPPP10997 89 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 PRR3P79522 188 aaKnown RBP3.82□□□□□ -1.8
UBE4A-203ENST00000545354 FAM53AQ6NSI3 398 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-203ENST00000545354 FAM216BQ8N7L0 139 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 SPRR3Q9UBC9 169 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 CHD6Q8TD26 2715 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 PRRC2BQ5JSZ5 2229 aaKnown RBP3.82□□□□□ -1.8
UBE4A-203ENST00000545354 DOCK4Q8N1I0 1966 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 NCOR2Q9Y618 2525 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 ZNF318Q5VUA4 2279 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 ARID1BQ8NFD5 2236 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV1OR21-1A0A087WYE8 117 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 A0A087WZ39 114 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 F8WEM9 126 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 WNT9BO14905 357 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV3-9P01782 118 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 MIFP14174 115 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 ZNF138P52744 262 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 Q75L30 129 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 LINC01465Q8N7H1 131 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 NUP214P35658 2090 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-203ENST00000545354 KIAA1549Q9HCM3 1950 aa3.82□□□□□ -1.8
UBE4A-203ENST00000545354 KIAA2026Q5HYC2 2103 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 NCOA6Q14686 2063 aaPredicted RBP3.81□□□□□ -1.8
UBE4A-203ENST00000545354 SCN3AQ9NY46 2000 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 RIF1Q5UIP0 2472 aaKnown RBP3.81□□□□□ -1.8
UBE4A-203ENST00000545354 CACNA1HO95180 2353 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 BRWD1Q9NSI6 2320 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 IGKV6D-41A0A0C4DH26 115 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 TRBV5-4A0A0C4DH59 114 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 TRBV6-1A0A0K0K1D8 114 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 BUB1B-PAK6H3BSN5 160 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 TRBV12-3P01733 135 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 EDDM3BP56851 147 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 LINC00313P59037 77 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 FHL1Q13642 323 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 CLLU1OSQ5K130 101 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 SCXQ7RTU7 201 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 FAM168AQ92567 244 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 Q96M66 194 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 PRR25Q96S07 402 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 SMAD5-AS1Q9Y6J3 95 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
UBE4A-203ENST00000545354 ATRXP46100 2492 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 TPRP12270 2363 aaKnown RBP3.8□□□□□ -1.8
UBE4A-203ENST00000545354 A0A0J9YY99 117 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 C6orf99Q4VX62 202 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 ATP1A1-AS1Q5TC04 95 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 SFTA2Q6UW10 78 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 GPHB5Q86YW7 130 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 LINC00269Q8N2A0 174 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 ZNF524Q96C55 264 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 DOCK11Q5JSL3 2073 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 IGKV1D-17A0A075B6S4 117 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 IGKV1-9A0A0C4DH69 117 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 M0R135 149 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 SNRNP200O75643 2136 aaKnown RBP3.8□□□□□ -1.8
UBE4A-203ENST00000545354 PRSS2P07478 247 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 TFF3Q07654 80 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 MORN5Q5VZ52 161 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 ZNF491Q8N8L2 437 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 FAM167A-AS1Q96KT0 104 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 FRYLO94915 3013 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 PLXNB3Q9ULL4 1909 aa3.8□□□□□ -1.8
UBE4A-203ENST00000545354 ANKRD11Q6UB99 2663 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-203ENST00000545354 TRIP12Q14669 1992 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 A0A0J9YX75 114 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV4-34P06331 123 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 CISD3P0C7P0 127 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 LINC00337Q8N6G1 96 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 C11orf72Q8NBR9 251 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 PRSS33Q8NF86 280 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 SCGB3A1Q96QR1 104 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 LCTP09848 1927 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 PTPRDP23468 1912 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 GVINP1Q7Z2Y8 2422 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms