RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 HLA-DQA1P01909 254 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 ZFP82Q8N141 532 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 SYT8Q8NBV8 401 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 FRZBQ92765 325 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 C9orf85Q96MD7 179 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 GNB1LQ9BYB4 327 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 SCRT2Q9NQ03 307 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
SCARB1-209ENST00000545305 CMYA5Q8N3K9 4069 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 A8MZ25 164 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 C1orf196B1AJZ1 125 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 M0R381 172 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 NTF3P20783 257 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 ZNF705AQ6ZN79 300 aaPredicted RBP10.01□□□□□ -0.81
SCARB1-209ENST00000545305 TMEM136Q6ZRR5 245 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 CSNK1G2-AS1Q8NCQ2 148 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 MDFICQ9P1T7 246 aa10.01□□□□□ -0.81
SCARB1-209ENST00000545305 IGHV4-4A0A075B6R2 117 aa10□□□□□ -0.81
SCARB1-209ENST00000545305 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
SCARB1-209ENST00000545305 TRGC1P0CF51 173 aa10□□□□□ -0.81
SCARB1-209ENST00000545305 RRN3P1Q2M238 152 aa10□□□□□ -0.81
SCARB1-209ENST00000545305 KPRPQ5T749 579 aaPredicted RBP10□□□□□ -0.81
SCARB1-209ENST00000545305 TMEM263Q8WUH6 116 aaKnown RBP10□□□□□ -0.81
SCARB1-209ENST00000545305 C16orf74Q96GX8 76 aa10□□□□□ -0.81
SCARB1-209ENST00000545305 RCHY1Q96PM5 261 aa10□□□□□ -0.81
SCARB1-209ENST00000545305 MRPL18Q9H0U6 180 aaKnown RBP10□□□□□ -0.81
SCARB1-209ENST00000545305 NXPH4O95158 308 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 APCSP02743 223 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 TRGC2P03986 189 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 FABP9Q0Z7S8 132 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 DEFB135Q30KP9 77 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 ZNF493Q6ZR52 646 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 AP1S3Q96PC3 154 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 SPXQ9BT56 116 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
SCARB1-209ENST00000545305 RAB5BP61020 215 aa9.98□□□□□ -0.81
SCARB1-209ENST00000545305 GATD1Q8NB37 220 aa9.98□□□□□ -0.81
SCARB1-209ENST00000545305 C11orf72Q8NBR9 251 aa9.98□□□□□ -0.81
SCARB1-209ENST00000545305 RNASE8Q8TDE3 154 aaKnown RBP9.98□□□□□ -0.81
SCARB1-209ENST00000545305 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
SCARB1-209ENST00000545305 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 M0R2P5 195 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 SPRY2O43597 315 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 PRM2P04554 102 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 AZU1P20160 251 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 Q6ZWC4 215 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 TMA7Q9Y2S6 64 aaKnown RBP9.97□□□□□ -0.81
SCARB1-209ENST00000545305 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
SCARB1-209ENST00000545305 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
SCARB1-209ENST00000545305 ZNF876PQ49A33 203 aa9.96□□□□□ -0.82
SCARB1-209ENST00000545305 PTH2Q96A98 100 aa9.96□□□□□ -0.82
SCARB1-209ENST00000545305 SLAQ13239 276 aa9.95□□□□□ -0.82
SCARB1-209ENST00000545305 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
SCARB1-209ENST00000545305 IL17DQ8TAD2 202 aa9.95□□□□□ -0.82
SCARB1-209ENST00000545305 RNF183Q96D59 192 aa9.95□□□□□ -0.82
SCARB1-209ENST00000545305 DPH3P1Q9H4G8 78 aa9.95□□□□□ -0.82
SCARB1-209ENST00000545305 PRB2P02812 416 aaPredicted RBP9.94□□□□□ -0.82
SCARB1-209ENST00000545305 EVI2AP22794 236 aa9.94□□□□□ -0.82
SCARB1-209ENST00000545305 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
SCARB1-209ENST00000545305 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
SCARB1-209ENST00000545305 AMN1Q8IY45 258 aa9.94□□□□□ -0.82
SCARB1-209ENST00000545305 OR11H2Q8NH07 326 aa9.94□□□□□ -0.82
SCARB1-209ENST00000545305 NDUFAF3Q9BU61 184 aa9.94□□□□□ -0.82
SCARB1-209ENST00000545305 X6R8D5 127 aa9.94□□□□□ -0.82
SCARB1-209ENST00000545305 K7EIL1 84 aa9.93□□□□□ -0.82
SCARB1-209ENST00000545305 MGPP08493 103 aa9.93□□□□□ -0.82
SCARB1-209ENST00000545305 MIFP14174 115 aa9.93□□□□□ -0.82
SCARB1-209ENST00000545305 DAZ2Q13117 558 aaKnown RBP9.93□□□□□ -0.82
SCARB1-209ENST00000545305 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
SCARB1-209ENST00000545305 MRPL16Q9NX20 251 aaKnown RBP9.93□□□□□ -0.82
SCARB1-209ENST00000545305 TP53TG1Q9Y2A0 90 aa9.93□□□□□ -0.82
SCARB1-209ENST00000545305 TRGV1A0A0A0MS02 117 aa9.92□□□□□ -0.82
SCARB1-209ENST00000545305 A8MWV9 139 aa9.92□□□□□ -0.82
SCARB1-209ENST00000545305 PHOX2AO14813 284 aa9.92□□□□□ -0.82
SCARB1-209ENST00000545305 C14orf178Q8N769 122 aaPredicted RBP9.92□□□□□ -0.82
SCARB1-209ENST00000545305 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
SCARB1-209ENST00000545305 MUC4Q99102 2169 aa9.92□□□□□ -0.82
SCARB1-209ENST00000545305 DNAH3Q8TD57 4116 aa9.92□□□□□ -0.82
SCARB1-209ENST00000545305 SRIP30626 198 aa9.91□□□□□ -0.82
SCARB1-209ENST00000545305 EMP1P54849 157 aa9.91□□□□□ -0.82
SCARB1-209ENST00000545305 LGALS9BQ3B8N2 356 aa9.91□□□□□ -0.82
SCARB1-209ENST00000545305 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
SCARB1-209ENST00000545305 DEFB121Q5J5C9 76 aa9.91□□□□□ -0.82
SCARB1-209ENST00000545305 RASL10AQ92737 203 aa9.91□□□□□ -0.82
SCARB1-209ENST00000545305 MGAM2Q2M2H8 2515 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 A0A087WWL8 130 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 RHODO00212 210 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 HIST1H2BKO60814 126 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 PPBPP02775 128 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 HIST1H2BJP06899 126 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 RAB4AP20338 218 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 HIST1H2BOP23527 126 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 CKS2P33552 79 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 HIST1H2BBP33778 126 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 HIST1H2BDP58876 126 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 HIST1H2BCP62807 126 aa9.9□□□□□ -0.82
SCARB1-209ENST00000545305 HIST2H2BEQ16778 126 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms