RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SPRNQ5BIV9 151 aa12.05□□□□□ -0.48
CHD4-210ENST00000544040 K7ENP7 123 aa12.04□□□□□ -0.48
CHD4-210ENST00000544040 SEM1Q6ZVN7 128 aa12.04□□□□□ -0.48
CHD4-210ENST00000544040 ATP6V0E2Q8NHE4 81 aa12.04□□□□□ -0.48
CHD4-210ENST00000544040 CADP27708 2225 aa12.04□□□□□ -0.48
CHD4-210ENST00000544040 KMT2EQ8IZD2 1858 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 J3QLI3 93 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 LGALS9O00182 355 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 LECT2O14960 151 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 H0YGX0 51 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 CRYGBP07316 175 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 PIFOQ8TCI5 191 aa12.03□□□□□ -0.48
CHD4-210ENST00000544040 UBE2AP49459 152 aa12.02□□□□□ -0.48
CHD4-210ENST00000544040 ZDBF2Q9HCK1 2354 aa12.02□□□□□ -0.48
CHD4-210ENST00000544040 ETV2O00321 342 aaPredicted RBP12.02□□□□□ -0.49
CHD4-210ENST00000544040 PROP1O75360 226 aa12.02□□□□□ -0.49
CHD4-210ENST00000544040 CTSZQ9UBR2 303 aa12.02□□□□□ -0.49
CHD4-210ENST00000544040 GREB1LQ9C091 1923 aaPredicted RBP12.02□□□□□ -0.49
CHD4-210ENST00000544040 ANK1P16157 1881 aa12.02□□□□□ -0.49
CHD4-210ENST00000544040 LINC01545Q5VT33 79 aa12.02□□□□□ -0.49
CHD4-210ENST00000544040 TEN1Q86WV5 123 aa12.02□□□□□ -0.49
CHD4-210ENST00000544040 IGLV1-44P01699 117 aa12.02□□□□□ -0.49
CHD4-210ENST00000544040 FOXI1Q12951 378 aa12.01□□□□□ -0.49
CHD4-210ENST00000544040 PRSS33Q8NF86 280 aa12.01□□□□□ -0.49
CHD4-210ENST00000544040 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
CHD4-210ENST00000544040 C16orf74Q96GX8 76 aa12.01□□□□□ -0.49
CHD4-210ENST00000544040 MRPL36Q9P0J6 103 aaKnown RBP12□□□□□ -0.49
CHD4-210ENST00000544040 SPTSSBQ8NFR3 76 aa12□□□□□ -0.49
CHD4-210ENST00000544040 VPREB3Q9UKI3 123 aa12□□□□□ -0.49
CHD4-210ENST00000544040 CACNA1EQ15878 2313 aa12□□□□□ -0.49
CHD4-210ENST00000544040 GP9P14770 177 aa12□□□□□ -0.49
CHD4-210ENST00000544040 MYLKQ15746 1914 aa12□□□□□ -0.49
CHD4-210ENST00000544040 WFDC11Q8NEX6 87 aa12□□□□□ -0.49
CHD4-210ENST00000544040 H3BUA1 57 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 DEFB4AO15263 64 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 PTH2Q96A98 100 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 AJUBAQ96IF1 538 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 HEATR5AQ86XA9 2040 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 H0Y9J4 135 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 TAX1BP3O14907 124 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 GRNP28799 593 aaKnown RBP11.99□□□□□ -0.49
CHD4-210ENST00000544040 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
CHD4-210ENST00000544040 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
CHD4-210ENST00000544040 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
CHD4-210ENST00000544040 IGHV4OR15-8A0A075B7B6 117 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 A0A087WW49 117 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 F8W735 103 aaPredicted RBP11.99□□□□□ -0.49
CHD4-210ENST00000544040 LYPD6BQ8NI32 183 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 GTSF1Q8WW33 167 aa11.99□□□□□ -0.49
CHD4-210ENST00000544040 IGHV4-38-2P0DP08 117 aa11.98□□□□□ -0.49
CHD4-210ENST00000544040 FAM215AQ9Y5M1 114 aa11.98□□□□□ -0.49
CHD4-210ENST00000544040 PRAC2D3DTV9 90 aa11.98□□□□□ -0.49
CHD4-210ENST00000544040 Q8N1Y9 231 aa11.98□□□□□ -0.49
CHD4-210ENST00000544040 IGKV2D-26A0A0A0MRZ7 120 aa11.97□□□□□ -0.49
CHD4-210ENST00000544040 DEFB1P60022 68 aa11.97□□□□□ -0.49
CHD4-210ENST00000544040 MPLKIPQ8TAP9 179 aa11.97□□□□□ -0.49
CHD4-210ENST00000544040 HIGD2BQ4VC39 106 aa11.97□□□□□ -0.49
CHD4-210ENST00000544040 I3L2K1 104 aa11.97□□□□□ -0.49
CHD4-210ENST00000544040 POU2AF1Q16633 256 aa11.97□□□□□ -0.49
CHD4-210ENST00000544040 IL15RAQ13261 267 aa11.97□□□□□ -0.49
CHD4-210ENST00000544040 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
CHD4-210ENST00000544040 PATE2Q6UY27 113 aa11.96□□□□□ -0.49
CHD4-210ENST00000544040 TOMM6Q96B49 74 aa11.96□□□□□ -0.49
CHD4-210ENST00000544040 NCOR1O75376 2440 aa11.96□□□□□ -0.49
CHD4-210ENST00000544040 SPTBN1Q01082 2364 aaKnown RBP11.96□□□□□ -0.5
CHD4-210ENST00000544040 LY6G6EA0A0G2JKS1 128 aa11.96□□□□□ -0.5
CHD4-210ENST00000544040 BLCAPP62952 87 aa11.96□□□□□ -0.5
CHD4-210ENST00000544040 U3KQA8 63 aa11.96□□□□□ -0.5
CHD4-210ENST00000544040 C11orf53Q8IXP5 236 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 LENEPQ9Y5L5 61 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 TRAV23DV6A0A075B6W5 121 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 ATP5G1P05496 136 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 CCL18P55774 89 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 ABCA1O95477 2261 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 IGHV7-81A0A0B4J1V7 117 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 SEC61GP60059 68 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 K7EIM0 57 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 NDUFA1O15239 70 aa11.95□□□□□ -0.5
CHD4-210ENST00000544040 SPART-AS1P0CW21 52 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 FAM110AQ9BQ89 295 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 HHLA3Q9XRX5 114 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 MIR7-3HGQ8N6C7 128 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 TRAV26-1A0A087WT03 109 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 WI2-2373I1.2A0A1W2PRP0 233 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 KAAG1Q9UBP8 84 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 G3V4G9 280 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 IGLV3-1P01715 115 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 FRMD6-AS1P0C7T7 363 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 TM2D2Q9BX73 214 aa11.94□□□□□ -0.5
CHD4-210ENST00000544040 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 DIRC1Q969H9 104 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 C11orf86A6NJI1 115 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 IGFL3Q6UXB1 125 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 IGKV4-1P06312 121 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 C9orf66Q5T8R8 295 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 266.6 ms