RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ADCYAP1	P18509	176 aa		7.25	□□□□□ -1.25
CPSF7-221	ENST00000543545	ZNF876P	Q49A33	203 aa		7.25	□□□□□ -1.25
CPSF7-221	ENST00000543545	FER1L6-AS1	Q8NA97	138 aa		7.25	□□□□□ -1.25
CPSF7-221	ENST00000543545	SYT8	Q8NBV8	401 aa		7.25	□□□□□ -1.25
CPSF7-221	ENST00000543545	IL17D	Q8TAD2	202 aa		7.25	□□□□□ -1.25
CPSF7-221	ENST00000543545	IL36B	Q9NZH7	164 aa		7.25	□□□□□ -1.25
CPSF7-221	ENST00000543545		A0A1W2PPQ1	181 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545		M0R381	172 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	MT-ND4L	P03901	98 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	CXCL1	P09341	107 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	C12orf74	Q32Q52	190 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	LGALS9B	Q3B8N2	356 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	DNLZ	Q5SXM8	178 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	SPANXN1	Q5VSR9	72 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	C9orf85	Q96MD7	179 aa		7.24	□□□□□ -1.25
CPSF7-221	ENST00000543545	PPP1R2P9	O14990	202 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	IGHV3-53	P01767	116 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	APOC3	P02656	99 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	MED14OS	P0DP75	135 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	CT83	Q5H943	113 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545		Q6ZTC4	211 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	ZNF575	Q86XF7	245 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	ZFP82	Q8N141	532 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	TSKU	Q8WUA8	353 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	RASL10A	Q92737	203 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	PGLYRP4	Q96LB8	373 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545	WWC2-AS2	Q96NR7	200 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545		V9GYV3	84 aa		7.23	□□□□□ -1.25
CPSF7-221	ENST00000543545		F2Z2F3	143 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545		F5H768	121 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	ATP5G1	P05496	136 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	OR5AL1	P0C617	328 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	RNF212	Q495C1	297 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	DMRTA1	Q5VZB9	504 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	LYZL1	Q6UWQ5	148 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	OR4C5	Q8NGB2	326 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	OR10AG1	Q8NH19	301 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	BORCS7	Q96B45	105 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	ANAPC16	Q96DE5	110 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	SCRT2	Q9NQ03	307 aa		7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	CARHSP1	Q9Y2V2	147 aa	Known RBP	7.22	□□□□□ -1.25
CPSF7-221	ENST00000543545	TRAV10	A0A0B4J240	114 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	HIGD1C	A8MV81	97 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	SNAI2	O43623	268 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	IGLC6	P0CF74	106 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	CACNG7	P62955	275 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	C10orf91	Q5T1B1	145 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	LINC00612	Q8N6U2	182 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	PHLDA1	Q8WV24	401 aa	Predicted RBP	7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	GTSF1	Q8WW33	167 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	PTH2	Q96A98	100 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	GFRA4	Q9GZZ7	299 aa		7.21	□□□□□ -1.26
CPSF7-221	ENST00000543545	TENM3	Q9P273	2699 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	DEFB131B	A0A096LNP1	70 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	IGHV3-73	A0A0B4J1V6	119 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545		A8MWV9	139 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	TWIST1	Q15672	202 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	ZFAND6	Q6FIF0	208 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	SVBP	Q8N300	66 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	CLRN3	Q8NCR9	226 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	MUC7	Q8TAX7	377 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	RPS10P5	Q9NQ39	176 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	NAT8B	Q9UHF3	227 aa		7.2	□□□□□ -1.26
CPSF7-221	ENST00000543545	TRAV4	A0A0B4J268	109 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	TRGV4	A0A0C4DH28	118 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	SMIM27	A0A1W2PRY6	76 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	C7orf77	A4D0Y5	90 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	FAM231B	A6NCW3	169 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	RS1	O15537	224 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	SNAPIN	O95295	136 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	SMIM17	P0DL12	118 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	NTF3	P20783	257 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	FAM74A4	Q5TZK3	123 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	CFAP126	Q5VTH2	177 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	SMIM15	Q7Z3B0	74 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	NUP35	Q8NFH5	326 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	ZNF479	Q96JC4	524 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	NDUFAF3	Q9BU61	184 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	CTDSP1	Q9GZU7	261 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545	JPT2	Q9H910	190 aa		7.19	□□□□□ -1.26
CPSF7-221	ENST00000543545		A0A087WWL8	130 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545		A0A1B0GUT8	65 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	CTRL	P40313	264 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	FOXA3	P55318	350 aa	Predicted RBP	7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	RIG	Q13278	110 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	PIK3CD-AS1	Q5SR53	167 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	WDR73	Q6P4I2	378 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	CEMP1	Q6PRD7	247 aa	Predicted RBP	7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	C14orf178	Q8N769	122 aa	Predicted RBP	7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	POM121L12	Q8N7R1	296 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	C18orf15	Q96N68	181 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	AP1S3	Q96PC3	154 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	MSRB1	Q9NZV6	116 aa		7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	KLK5	Q9Y337	293 aa	Predicted RBP	7.18	□□□□□ -1.26
CPSF7-221	ENST00000543545	STAB2	Q8WWQ8	2551 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	NUPR2	A6NF83	97 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	IGLL5	B9A064	214 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545		F5H697	171 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	NXPH4	O95158	308 aa		7.17	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms