RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 CXCL6P80162 114 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 LOXL1Q08397 574 aaPredicted RBP2.87□□□□□ -1.95
MDM2-229ENST00000543046 C2orf83Q53S99 150 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 LINC00322Q6ZN03 302 aaPredicted RBP2.87□□□□□ -1.95
MDM2-229ENST00000543046 GOLT1AQ6ZVE7 132 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 RPS19BP1Q86WX3 136 aaKnown RBP2.87□□□□□ -1.95
MDM2-229ENST00000543046 APRG1Q8IVJ8 170 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 Q8N8P6 123 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 FXYD5Q96DB9 178 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 RTL8AQ9BWD3 113 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 PRO1854Q9UHT4 67 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 TP53TG1Q9Y2A0 90 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 CEP192Q8TEP8 1941 aa2.87□□□□□ -1.95
MDM2-229ENST00000543046 TRAV12-2A0A075B6T6 113 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 TRAV13-1A0A0B4J241 112 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 TRAV40A0A0B4J280 105 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 A0A0B4J2C4 111 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 PGPA6NDG6 321 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 H3BMM0 161 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 LY6LH3BQJ8 138 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 H3BVH4 76 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 K7EMI3 77 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 UPK2O00526 184 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 EFNA2O43921 213 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 NDUFC2O95298 119 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 FSTL3O95633 263 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 TCRAP04437 139 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 PYYP10082 97 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 LEPP41159 167 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 EFNA4P52798 201 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 SUB1P53999 127 aaKnown RBP eCLIP2.86□□□□□ -1.95
MDM2-229ENST00000543046 ZNF816Q0VGE8 651 aaPredicted RBP2.86□□□□□ -1.95
MDM2-229ENST00000543046 ZNF56Q15929 161 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 NNATQ16517 81 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 MRPL51Q4U2R6 128 aaKnown RBP2.86□□□□□ -1.95
MDM2-229ENST00000543046 HES3Q5TGS1 186 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 HRCT1Q6UXD1 115 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 Q8IYB0 196 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 UBE2WQ96B02 151 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 LINC00477Q96M19 166 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 C9orf85Q96MD7 179 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 OTORQ9NRC9 128 aa2.86□□□□□ -1.95
MDM2-229ENST00000543046 KLF13Q9Y2Y9 288 aaPredicted RBP2.86□□□□□ -1.95
MDM2-229ENST00000543046 HEATR1Q9H583 2144 aaKnown RBP2.86□□□□□ -1.95
MDM2-229ENST00000543046 COL4A5P29400 1685 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 IGKV3D-11A0A0A0MRZ8 115 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 IGHV3-35A0A0C4DH35 117 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 LOC389332A0A1B0GUA5 103 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 FAM236AA0A1B0GUQ0 79 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 FAM236BA0A1B0GV22 79 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 D6R8Y8 96 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 F8VRH5 84 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 J3QQQ9 107 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 MRPS12O15235 138 aaKnown RBP2.85□□□□□ -1.95
MDM2-229ENST00000543046 IGHV3-33P01772 117 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 ARMS2P0C7Q2 107 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 COX6B1P14854 86 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 CKS2P33552 79 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 PFN2P35080 140 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 MRPS36P82909 103 aaKnown RBP2.85□□□□□ -1.95
MDM2-229ENST00000543046 TMEM155Q4W5P6 130 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 C1orf195Q5TG92 126 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 C10orf113Q5VZT2 155 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 PVRIGQ6DKI7 326 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 LINC00336Q6ZUF6 198 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 AAED1Q7RTV5 226 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 SERP2Q8N6R1 65 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 SLC25A29Q8N8R3 303 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 COPS9Q8WXC6 57 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 FAM19A4Q96LR4 140 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 FOXC2Q99958 501 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 UPK3BQ9BT76 320 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 SHANK2-AS3Q9BTD1 123 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 TTTY13Q9BZ97 58 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 DPH3P1Q9H4G8 78 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 ESM1Q9NQ30 184 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 TMEM14BQ9NUH8 114 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 LAMTOR3Q9UHA4 124 aa2.85□□□□□ -1.95
MDM2-229ENST00000543046 TIMM8BQ9Y5J9 83 aaPredicted RBP2.85□□□□□ -1.95
MDM2-229ENST00000543046 MYOFQ9NZM1 2061 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 LRP4O75096 1905 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 IGLV2-18A0A075B6J9 118 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 TMSB15BA0A087X1C1 80 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 A0A0J9YW62 118 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 A0A0J9YY99 117 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 A0A1W2PNU3 283 aaPredicted RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 TMEM30CPA0ZSE6 113 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 CDX4O14627 284 aaPredicted RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 BCE1O60756 84 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 SS18L1O75177 396 aaPredicted RBP2.84□□□□□ -1.95
MDM2-229ENST00000543046 IGHV3-30P01768 117 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 IGHV3-30-5P0DP03 117 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 MAGEA5P43359 124 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 C2orf82Q6UX34 121 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 C2orf66Q6UXQ4 117 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 PATE2Q6UY27 113 aa2.84□□□□□ -1.95
MDM2-229ENST00000543046 Q6ZT83 130 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 1025.2 ms