RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 GNRH2O43555 120 aa10.42□□□□□ -0.74
SCNN1A-217ENST00000542260 Q5VSD8 79 aa10.42□□□□□ -0.74
SCNN1A-217ENST00000542260 FBLL1A6NHQ2 334 aaKnown RBP10.41□□□□□ -0.74
SCNN1A-217ENST00000542260 PFN1P07737 140 aaKnown RBP10.41□□□□□ -0.74
SCNN1A-217ENST00000542260 H2AFB1P0C5Y9 115 aa10.41□□□□□ -0.74
SCNN1A-217ENST00000542260 GATA1P15976 413 aaPredicted RBP10.41□□□□□ -0.74
SCNN1A-217ENST00000542260 KRTAP10-1P60331 282 aa10.41□□□□□ -0.74
SCNN1A-217ENST00000542260 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
SCNN1A-217ENST00000542260 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
SCNN1A-217ENST00000542260 LOC100131303A0A0U1RQF7 123 aa10.4□□□□□ -0.74
SCNN1A-217ENST00000542260 K7EQM0 130 aa10.4□□□□□ -0.74
SCNN1A-217ENST00000542260 FHITP49789 147 aa10.4□□□□□ -0.74
SCNN1A-217ENST00000542260 LINC01556Q5JQF7 62 aa10.4□□□□□ -0.74
SCNN1A-217ENST00000542260 NTN5Q8WTR8 489 aaPredicted RBP10.4□□□□□ -0.74
SCNN1A-217ENST00000542260 PRADC1Q9BSG0 188 aa10.4□□□□□ -0.74
SCNN1A-217ENST00000542260 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 EIF3GO75821 320 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 RHOHQ15669 191 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 ZNF876PQ49A33 203 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 SFT2D1Q8WV19 159 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 MBD3L1Q8WWY6 194 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 RAB24Q969Q5 203 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 FAT1Q14517 4588 aa10.39□□□□□ -0.75
SCNN1A-217ENST00000542260 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
SCNN1A-217ENST00000542260 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
SCNN1A-217ENST00000542260 GNG5P63218 68 aa10.38□□□□□ -0.75
SCNN1A-217ENST00000542260 SLC25A29Q8N8R3 303 aa10.38□□□□□ -0.75
SCNN1A-217ENST00000542260 TVP23CQ96ET8 276 aa10.38□□□□□ -0.75
SCNN1A-217ENST00000542260 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
SCNN1A-217ENST00000542260 IBA57-AS1B1ANH7 110 aa10.37□□□□□ -0.75
SCNN1A-217ENST00000542260 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
SCNN1A-217ENST00000542260 CXorf1O96002 111 aa10.37□□□□□ -0.75
SCNN1A-217ENST00000542260 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
SCNN1A-217ENST00000542260 ZNF726P1Q15940 193 aa10.37□□□□□ -0.75
SCNN1A-217ENST00000542260 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
SCNN1A-217ENST00000542260 TMEM70Q9BUB7 260 aa10.37□□□□□ -0.75
SCNN1A-217ENST00000542260 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 A0A1B0GV50 99 aa10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 HMGB3O15347 200 aaKnown RBP10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 TCRAP04437 139 aa10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 STAG3L2P0CL84 134 aa10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 MGST1P10620 155 aaKnown RBP10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 CFAP126Q5VTH2 177 aa10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 Q9HAA7 133 aa10.36□□□□□ -0.75
SCNN1A-217ENST00000542260 LRCOL1A6NCL2 159 aa10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 RS1O15537 224 aa10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 FGF8P55075 233 aaPredicted RBP10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 SMUG1Q53HV7 270 aa10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 LELP1Q5T871 98 aa10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 Q8N814 137 aa10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 HERC1Q15751 4861 aa10.35□□□□□ -0.75
SCNN1A-217ENST00000542260 VPS13BQ7Z7G8 4022 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 GCGP01275 180 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 IFNA1P01562 189 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 LAGE3Q14657 143 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 PTH2Q96A98 100 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 PSG8Q9UQ74 426 aa10.34□□□□□ -0.75
SCNN1A-217ENST00000542260 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 IGHV3-33P01772 117 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 SMR3BP02814 79 aaPredicted RBP10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 IGHV3-30-3P0DP02 117 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 GCHFRP30047 84 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 FLI1Q01543 452 aaPredicted RBP10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 ZNF506Q5JVG8 444 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 Q6ZSN1 163 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 CYB561D1Q8N8Q1 229 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 TMEM75Q8N9X5 138 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 ATP6V0E2Q8NHE4 81 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 GTSF1LQ9H1H1 148 aa10.33□□□□□ -0.76
SCNN1A-217ENST00000542260 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
SCNN1A-217ENST00000542260 LINC00862A6NCI5 91 aa10.32□□□□□ -0.76
SCNN1A-217ENST00000542260 ZNF80P51504 273 aaPredicted RBP10.32□□□□□ -0.76
SCNN1A-217ENST00000542260 PRNTQ86SH4 94 aa10.32□□□□□ -0.76
SCNN1A-217ENST00000542260 SUN5Q8TC36 379 aa10.32□□□□□ -0.76
SCNN1A-217ENST00000542260 MED9Q9NWA0 146 aa10.32□□□□□ -0.76
SCNN1A-217ENST00000542260 PGPEP1LA6NFU8 196 aa10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 A8MWV9 139 aa10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 TAGLN2P37802 199 aaKnown RBP10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 SUMO1P63165 101 aaKnown RBP10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 MANBALQ9NQG1 85 aa10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 GNG13Q9P2W3 67 aa10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 EPDR1Q9UM22 224 aa10.31□□□□□ -0.76
SCNN1A-217ENST00000542260 RAB19A4D1S5 217 aa10.3□□□□□ -0.76
SCNN1A-217ENST00000542260 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
SCNN1A-217ENST00000542260 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
SCNN1A-217ENST00000542260 CCL20P78556 96 aa10.3□□□□□ -0.76
SCNN1A-217ENST00000542260 PIK3CD-AS1Q5SR53 167 aa10.3□□□□□ -0.76
SCNN1A-217ENST00000542260 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms