RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 F8VRH5 84 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 SCGB2A2Q13296 93 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 ZNF418Q8TF45 676 aaPredicted RBP7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 SLC50A1Q9BRV3 221 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 LOC107984156A0A0G2JMH3 177 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 A0A1B0GWB2 263 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 EBI3Q14213 229 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 RRN3P1Q2M238 152 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 CLEC2AQ6UVW9 174 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 Q6ZS46 218 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 ARL17AQ8IVW1 177 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 ZFAND2AQ8N6M9 145 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 PIFOQ8TCI5 191 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 BAALCQ8WXS3 180 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 LINC01549A6NIU2 74 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 SCGB1D4Q6XE38 83 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 RAXQ9Y2V3 346 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 PHLDA3Q9Y5J5 127 aa7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 USP9XQ93008 2570 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE1-207ENST00000540998 NIPBLQ6KC79 2804 aaeCLIP7.84□□□□□ -1.16
CDC42SE1-207ENST00000540998 H7C1H1 209 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 EEF1AKMT3Q96AZ1 226 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 OPRPNQ99935 248 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 NACAE9PAV3 2078 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 SCGB2A1O75556 95 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 SRSF2Q01130 221 aaKnown RBP7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 GAGE13Q4V321 117 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 MRPL16Q9NX20 251 aaKnown RBP7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 PRO0461Q9UI25 63 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 MYO18BQ8IUG5 2567 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 FBN2P35556 2912 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 IGHV3-64A0A075B6Q5 118 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 CENPVL3A0A0U1RRI6 287 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 Q5PR19 223 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 C9orf47Q6ZRZ4 202 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 NEXN-AS1Q8NBZ9 246 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 SMPXQ9UHP9 88 aa7.83□□□□□ -1.16
CDC42SE1-207ENST00000540998 RBAKDNA6NC62 111 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 K7ENP7 123 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 PLNP26678 52 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 SIGMAR1Q99720 223 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 C11orf86A6NJI1 115 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 PSMB2P49721 201 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 TSPEAR-AS2P59090 65 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 FHL3Q13643 280 aa7.82□□□□□ -1.16
CDC42SE1-207ENST00000540998 TSHBP01222 138 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 FAM74A4Q5TZK3 123 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 NFE4Q86UQ8 179 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 C5orf56Q8N8D9 126 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 CACNA1AO00555 2505 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 CRYGDP07320 174 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 RNASE3P12724 160 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 MINOS1Q5TGZ0 78 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 MINOS1-NBL1R4GNA1 71 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 TMEM95Q3KNT9 176 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 ITLN2Q8WWU7 325 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
CDC42SE1-207ENST00000540998 ZFYVE26Q68DK2 2539 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 TRAV41A0A0B4J266 112 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 HOXA3O43365 443 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 F5H697 171 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 F8W1H4 67 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 NPFFO15130 113 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 ASIPP42127 132 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 UBE2E1P51965 193 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 LINC00477Q96M19 166 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 ZNF580Q9UK33 172 aa7.8□□□□□ -1.16
CDC42SE1-207ENST00000540998 TRAV12-2A0A075B6T6 113 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 H7C2G1 150 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 TSPAN13O95857 204 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 BLCAPP62952 87 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 DPH3P1Q9H4G8 78 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 ZNF256Q9Y2P7 627 aaPredicted RBP7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 U3KQE9 123 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 OR10J6PQ8NGY7 276 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 LMO4P61968 165 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 SYT8Q8NBV8 401 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 MRAP2Q96G30 205 aa7.79□□□□□ -1.16
CDC42SE1-207ENST00000540998 FAM208BQ5VWN6 2430 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 IGLV4-69A0A075B6H9 119 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 IGHV4-4A0A075B6R2 117 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 TRAV12-3A0A0B4J271 114 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 NDUFS8O00217 210 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 NF1P21359 2839 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 ORMDL2Q53FV1 153 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 TMEM170BQ5T4T1 132 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 TMEM190Q8WZ59 177 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 CLUHP3Q96NS8 147 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 KIR2DL4Q99706 377 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 WNK1Q9H4A3 2382 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 TRBV7-1A0A0A6YYK4 115 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 IGHV4-38-2P0DP08 117 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms