RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 NIT2Q9NQR4 276 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 MSRB1Q9NZV6 116 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 HLA-DRB4X5D2U9 266 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 AGRNO00468 2067 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 MGAM2Q2M2H8 2515 aa9.21□□□□□ -0.94
SMAD3-204ENST00000540846 CDKN1BP46527 198 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 AMTP48728 403 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 DEFB131AP59861 70 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 SSTP61278 116 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 MRPL51Q4U2R6 128 aaKnown RBP9.2□□□□□ -0.94
SMAD3-204ENST00000540846 URB1-AS1Q96HZ7 61 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 MAP6D1Q9H9H5 199 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 SCRT2Q9NQ03 307 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 PMCHP20382 165 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 ODF3L2Q3SX64 289 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 TDRG1Q3Y452 100 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 RNASEKQ6P5S7 137 aaKnown RBP9.2□□□□□ -0.94
SMAD3-204ENST00000540846 Q6ZWC4 215 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 ORMDL3Q8N138 153 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 CHCHD1Q96BP2 118 aaKnown RBP9.2□□□□□ -0.94
SMAD3-204ENST00000540846 RNF185Q96GF1 192 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 NOTCH1P46531 2555 aa9.2□□□□□ -0.94
SMAD3-204ENST00000540846 D6R8Y8 96 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 M0R2Z0 102 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 HSBP1O75506 76 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 NXPH4O95158 308 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 IGKV3-20P01619 116 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 FAM159AQ6UWV7 190 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 NIT1Q86X76 327 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
SMAD3-204ENST00000540846 TRAV12-3A0A0B4J271 114 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 H3BMM0 161 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 PPBPP02775 128 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 S100A4P26447 101 aaKnown RBP9.18□□□□□ -0.94
SMAD3-204ENST00000540846 SPINK13Q1W4C9 94 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 CDPF1Q6NVV7 123 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 PRELID3AQ96N28 172 aa9.18□□□□□ -0.94
SMAD3-204ENST00000540846 RNASE3P12724 160 aaKnown RBP9.17□□□□□ -0.94
SMAD3-204ENST00000540846 RAB4AP20338 218 aa9.17□□□□□ -0.94
SMAD3-204ENST00000540846 EGFEM1PQ0D2K5 195 aa9.17□□□□□ -0.94
SMAD3-204ENST00000540846 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
SMAD3-204ENST00000540846 FAM19A2Q8N3H0 131 aa9.17□□□□□ -0.94
SMAD3-204ENST00000540846 TRAV12-2A0A075B6T6 113 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 RBMY1BA6NDE4 496 aaKnown RBP9.16□□□□□ -0.94
SMAD3-204ENST00000540846 RBMY1EA6NEQ0 496 aaKnown RBP9.16□□□□□ -0.94
SMAD3-204ENST00000540846 GNRH2O43555 120 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 CD7P09564 240 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 RBMY1DP0C7P1 496 aaKnown RBP9.16□□□□□ -0.94
SMAD3-204ENST00000540846 LINC00614P0C842 121 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 CKS2P33552 79 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 SMIM15Q7Z3B0 74 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 CLUHP3Q96NS8 147 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 FAM110AQ9BQ89 295 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 G3V4G9 280 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 NPYP01303 97 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 EVI2AP22794 236 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 KRTAP10-11P60412 298 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 ZNF124Q15973 351 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 PHLDA3Q9Y5J5 127 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 TIMM8BQ9Y5J9 83 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-204ENST00000540846 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
SMAD3-204ENST00000540846 MUC4Q99102 2169 aa9.15□□□□□ -0.94
SMAD3-204ENST00000540846 IGHV1-24A0A0C4DH33 117 aa9.15□□□□□ -0.95
SMAD3-204ENST00000540846 SMKR1H3BMG3 65 aa9.15□□□□□ -0.95
SMAD3-204ENST00000540846 NCR2O95944 276 aa9.15□□□□□ -0.95
SMAD3-204ENST00000540846 IGHV1OR15-1A0A075B7D0 117 aa9.14□□□□□ -0.95
SMAD3-204ENST00000540846 IGHV3-16A0A0C4DH30 117 aa9.14□□□□□ -0.95
SMAD3-204ENST00000540846 M0R381 172 aa9.14□□□□□ -0.95
SMAD3-204ENST00000540846 CRXO43186 299 aaPredicted RBP9.14□□□□□ -0.95
SMAD3-204ENST00000540846 C9orf85Q96MD7 179 aa9.14□□□□□ -0.95
SMAD3-204ENST00000540846 AP1S3Q96PC3 154 aa9.14□□□□□ -0.95
SMAD3-204ENST00000540846 WFDC10AQ9H1F0 79 aa9.14□□□□□ -0.95
SMAD3-204ENST00000540846 AP5S1Q9NUS5 200 aa9.14□□□□□ -0.95
SMAD3-204ENST00000540846 FA2HQ7L5A8 372 aa9.13□□□□□ -0.95
SMAD3-204ENST00000540846 Q8N1Y9 231 aa9.13□□□□□ -0.95
SMAD3-204ENST00000540846 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
SMAD3-204ENST00000540846 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
SMAD3-204ENST00000540846 PCP4L1A6NKN8 68 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 OR11H12B2RN74 326 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 SCGB1D1O95968 90 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 RBMY1A1P0DJD3 496 aaKnown RBP9.12□□□□□ -0.95
SMAD3-204ENST00000540846 RBMY1CP0DJD4 496 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 IFI27P40305 119 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-204ENST00000540846 KRTDAPP60985 99 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 RBMY1FQ15415 496 aaKnown RBP9.12□□□□□ -0.95
SMAD3-204ENST00000540846 MRAP2Q96G30 205 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 SPRY2O43597 315 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 C3orf79P0CE67 100 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 CMC4P56277 68 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-204ENST00000540846 FXYD7P58549 80 aa9.12□□□□□ -0.95
SMAD3-204ENST00000540846 PMCHL1Q16048 86 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms