RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RAB9AP51151 201 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 FXYD2P54710 66 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 RRN3P1Q2M238 152 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 KLK9Q2XQG4 91 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 C12orf74Q32Q52 190 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 TTC9CQ8N5M4 171 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 MYOZ3Q8TDC0 251 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 RAB37Q96AX2 223 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 RNF185Q96GF1 192 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 DKK2Q9UBU2 259 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 KLK9Q9UKQ9 250 aa5.9□□□□□ -1.46
CCDC60-204ENST00000539847 TGP01266 2768 aa5.9□□□□□ -1.47
CCDC60-204ENST00000539847 IGLV2-18A0A075B6J9 118 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 A0A087WX48 190 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 TMEM213A2RRL7 107 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 NPIPB5A8MRT5 1133 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 F5H697 171 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 TRIAP1O43715 76 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 ENSAO43768 121 aaKnown RBP5.89□□□□□ -1.47
CCDC60-204ENST00000539847 FCN3O75636 299 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 IGHV3-48P01763 117 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 PRSS1P07477 247 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 MSMBP08118 114 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 MED14OSP0DP75 135 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 LEPP41159 167 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 MFAP4P55083 255 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 RUSC1-AS1Q66K80 236 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 NPBQ8NG41 125 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 MRAP2Q96G30 205 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 ASCL2Q99929 193 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 DYNLRB1Q9NP97 96 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 HIF1ANQ9NWT6 349 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 ZNRD1Q9P1U0 126 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 PRO0461Q9UI25 63 aa5.89□□□□□ -1.47
CCDC60-204ENST00000539847 IGHV1-3A0A0C4DH29 117 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 H3BMG7 143 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 LY6LH3BQJ8 138 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 BUB1B-PAK6H3BSN5 160 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 J3QLI3 93 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 M0QXV9 152 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 GNG7O60262 68 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 EGR2P11161 476 aaPredicted RBP5.88□□□□□ -1.47
CCDC60-204ENST00000539847 GATA3P23771 443 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 LYRM7Q5U5X0 104 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 MRPL53Q96EL3 112 aaKnown RBP5.88□□□□□ -1.47
CCDC60-204ENST00000539847 SPAG8Q99932 426 aaPredicted RBP5.88□□□□□ -1.47
CCDC60-204ENST00000539847 SPANXA1Q9NS26 97 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 TSSC4Q9Y5U2 329 aaPredicted RBP5.88□□□□□ -1.47
CCDC60-204ENST00000539847 WNK2Q9Y3S1 2297 aa5.88□□□□□ -1.47
CCDC60-204ENST00000539847 TRBV7-3A0A075B6L6 115 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 H3BTX0 84 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 H7C1H1 209 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 KLRD1Q13241 179 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 DIAPH2-AS1Q14236 149 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 WFDC2Q14508 124 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 LAGE3Q14657 143 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 ZNF575Q86XF7 245 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 C17orf77Q96MU5 243 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 MRPL16Q9NX20 251 aaKnown RBP5.87□□□□□ -1.47
CCDC60-204ENST00000539847 CYSLTR1Q9Y271 337 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 TIMM8BQ9Y5J9 83 aaPredicted RBP5.87□□□□□ -1.47
CCDC60-204ENST00000539847 TNCP24821 2201 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 NOTCH1P46531 2555 aa5.87□□□□□ -1.47
CCDC60-204ENST00000539847 IGKV2D-26A0A0A0MRZ7 120 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 CENPVL3A0A0U1RRI6 287 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 NCBP2LA6PVI3 153 aaKnown RBP5.86□□□□□ -1.47
CCDC60-204ENST00000539847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.86□□□□□ -1.47
CCDC60-204ENST00000539847 NDUFA3O95167 84 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 IL4P05112 153 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 TCTAP57738 103 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 CKS1BP61024 79 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 LMO4P61968 165 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 ZC2HC1BQ5TFG8 222 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 OR11H6Q8NGC7 330 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 C8orf49Q96NF6 230 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 GTSF1LQ9H1H1 148 aa5.86□□□□□ -1.47
CCDC60-204ENST00000539847 NHP2Q9NX24 153 aaKnown RBP5.86□□□□□ -1.47
CCDC60-204ENST00000539847 TRRAPQ9Y4A5 3859 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 IGLV11-55A0A075B6I3 123 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 TRBV20-1A0A075B6N2 111 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 OR11H12B2RN74 326 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 F8VRH5 84 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 PPP1R17O96001 155 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 CCL8P80075 99 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 SMAGPQ0VAQ4 97 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 FOXI1Q12951 378 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 ORMDL2Q53FV1 153 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 PAPPA-AS1Q5QFB9 102 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 SBSPONQ8IVN8 264 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 OR11H1Q8NG94 326 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 OR11H2Q8NH07 326 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 RPEQ96AT9 228 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 HIST1H4GQ99525 98 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 C20orf78Q9BR46 151 aa5.85□□□□□ -1.47
CCDC60-204ENST00000539847 NAA38Q9BRA0 125 aaKnown RBP5.85□□□□□ -1.47
CCDC60-204ENST00000539847 TPPP3Q9BW30 176 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms