RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ASIPP42127 132 aa12.49□□□□□ -0.41
CLN6-202ENST00000538696 SSTP61278 116 aa12.49□□□□□ -0.41
CLN6-202ENST00000538696 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
CLN6-202ENST00000538696 C1orf158Q8N1D5 194 aa12.49□□□□□ -0.41
CLN6-202ENST00000538696 RNF183Q96D59 192 aa12.49□□□□□ -0.41
CLN6-202ENST00000538696 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 SNAI2O43623 268 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 MT-ND6P03923 174 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 TRGC1P0CF51 173 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 RCHY1Q96PM5 261 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 SPATA25Q9BR10 227 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
CLN6-202ENST00000538696 TIMM8BQ9Y5J9 83 aaPredicted RBP12.48□□□□□ -0.41
CLN6-202ENST00000538696 SPRY2O43597 315 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
CLN6-202ENST00000538696 DNLZQ5SXM8 178 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 GATD1Q8NB37 220 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 OR10AG1Q8NH19 301 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 SSBP4Q9BWG4 385 aaPredicted RBP12.47□□□□□ -0.41
CLN6-202ENST00000538696 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 TP53TG3Q9ULZ0 132 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
CLN6-202ENST00000538696 F2Z2F3 143 aa12.46□□□□□ -0.41
CLN6-202ENST00000538696 OR5AL1P0C617 328 aa12.46□□□□□ -0.41
CLN6-202ENST00000538696 MED14OSP0DP75 135 aa12.46□□□□□ -0.41
CLN6-202ENST00000538696 RNASE3P12724 160 aaKnown RBP12.46□□□□□ -0.41
CLN6-202ENST00000538696 SLAQ13239 276 aa12.46□□□□□ -0.41
CLN6-202ENST00000538696 TDRG1Q3Y452 100 aa12.46□□□□□ -0.41
CLN6-202ENST00000538696 ZNF705AQ6ZN79 300 aaPredicted RBP12.46□□□□□ -0.41
CLN6-202ENST00000538696 A0A1B0GW15 77 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 APCSP02743 223 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 S100A8P05109 93 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 S100A4P26447 101 aaKnown RBP12.45□□□□□ -0.42
CLN6-202ENST00000538696 KIAA1644Q3SXP7 199 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 C20orf144Q9BQM9 153 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 SCRT2Q9NQ03 307 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 MSRB1Q9NZV6 116 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 GOLT1BQ9Y3E0 138 aa12.45□□□□□ -0.42
CLN6-202ENST00000538696 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
CLN6-202ENST00000538696 IGHV3-16A0A0C4DH30 117 aa12.44□□□□□ -0.42
CLN6-202ENST00000538696 TWIST1Q15672 202 aa12.44□□□□□ -0.42
CLN6-202ENST00000538696 X6R8D5 127 aa12.44□□□□□ -0.42
CLN6-202ENST00000538696 NTF3P20783 257 aa12.43□□□□□ -0.42
CLN6-202ENST00000538696 CACNG7P62955 275 aa12.43□□□□□ -0.42
CLN6-202ENST00000538696 OR11H2Q8NH07 326 aa12.43□□□□□ -0.42
CLN6-202ENST00000538696 TRGV11A0A075B6L2 103 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 IGHV4-4A0A075B6R2 117 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 TMEM256Q8N2U0 113 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 LINC01587Q99440 93 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 TMEM208Q9BTX3 173 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 ZMAT4Q9H898 229 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 TENM3Q9P273 2699 aa12.42□□□□□ -0.42
CLN6-202ENST00000538696 CBY3A6NI87 242 aa12.41□□□□□ -0.42
CLN6-202ENST00000538696 PRM2P04554 102 aa12.41□□□□□ -0.42
CLN6-202ENST00000538696 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
CLN6-202ENST00000538696 NDUFA6P56556 154 aa12.41□□□□□ -0.42
CLN6-202ENST00000538696 SPANXN1Q5VSR9 72 aa12.41□□□□□ -0.42
CLN6-202ENST00000538696 ZNF493Q6ZR52 646 aa12.41□□□□□ -0.42
CLN6-202ENST00000538696 LINC00467Q9BRT7 94 aa12.41□□□□□ -0.42
CLN6-202ENST00000538696 M0R381 172 aa12.4□□□□□ -0.42
CLN6-202ENST00000538696 NXPH4O95158 308 aa12.4□□□□□ -0.42
CLN6-202ENST00000538696 PHLDA3Q9Y5J5 127 aa12.4□□□□□ -0.42
CLN6-202ENST00000538696 HTN1P15515 57 aa12.39□□□□□ -0.43
CLN6-202ENST00000538696 AMN1Q8IY45 258 aa12.39□□□□□ -0.43
CLN6-202ENST00000538696 NBEAL2Q6ZNJ1 2754 aa12.39□□□□□ -0.43
CLN6-202ENST00000538696 S100A6P06703 90 aa12.38□□□□□ -0.43
CLN6-202ENST00000538696 SRIP30626 198 aa12.38□□□□□ -0.43
CLN6-202ENST00000538696 FAM104BQ5XKR9 115 aa12.38□□□□□ -0.43
CLN6-202ENST00000538696 Q8NAQ8 132 aa12.38□□□□□ -0.43
CLN6-202ENST00000538696 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
CLN6-202ENST00000538696 IGHV4-28A0A0C4DH34 117 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 SMIM9A6NGZ8 99 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 MIFP14174 115 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 AZU1P20160 251 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 SNRPEP62304 92 aaKnown RBP12.37□□□□□ -0.43
CLN6-202ENST00000538696 RRN3P1Q2M238 152 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 DMRTA1Q5VZB9 504 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 RNF185Q96GF1 192 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 EVI2AP22794 236 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
CLN6-202ENST00000538696 ALKBH7Q9BT30 221 aaPredicted RBP12.37□□□□□ -0.43
CLN6-202ENST00000538696 C5orf52A6NGY3 159 aa12.36□□□□□ -0.43
CLN6-202ENST00000538696 DEFB4AO15263 64 aa12.36□□□□□ -0.43
CLN6-202ENST00000538696 MRPL51Q4U2R6 128 aaKnown RBP12.36□□□□□ -0.43
CLN6-202ENST00000538696 C11orf72Q8NBR9 251 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms