RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	CCL24	O00175	119 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SNAI2	O43623	268 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	AMBP	P02760	352 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	OR5AL1	P0C617	328 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	FABP4	P15090	132 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TSPO	P30536	169 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	CACNG7	P62955	275 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	CENPE	Q02224	2701 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	KIAA1644	Q3SXP7	199 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	PDZD11	Q5EBL8	140 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	DNLZ	Q5SXM8	178 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	PRR9	Q5T870	116 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	LYZL1	Q6UWQ5	148 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ADAMTSL5	Q6ZMM2	481 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	BAGE3	Q86Y29	109 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	C18orf32	Q8TCD1	76 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SPAG8	Q99932	426 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	CITED2	Q99967	270 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TPPP3	Q9BW30	176 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ZAN	Q9Y493	2812 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	C7orf71	A4D174	169 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	OR4C46	A6NHA9	309 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	USP17L23	D6RBM5	183 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983		F6UB75	175 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	CRLF1	O75462	422 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SERF1A	O75920	110 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SCGB1D1	O95968	90 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	GPX1	P07203	203 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ZNF705D	P0CH99	300 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ZNF705B	P0CI00	300 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ASIP	P42127	132 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TFPI2	P48307	235 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	DEFB114	Q30KQ6	69 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	NDUFA11	Q86Y39	141 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TMEM61	Q8N0U2	210 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	NEXN-AS1	Q8NBZ9	246 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	OR10D4P	Q8NGN7	298 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	OR2K2	Q8NGT1	345 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	DUX3	Q96PT4	197 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	C12orf57	Q99622	126 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TMEM191A	Q9H0A3	160 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TP53TG3	Q9ULZ0	132 aa		4.07	□□□□□ -1.76
NPIPB3-208	ENST00000537983	IGHV4-4	A0A075B6R2	117 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ZNF324	O75467	553 aa	Predicted RBP	4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	IGKV2-30	P06310	120 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	HLA-DRB4	P13762	266 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	RNASE4	P34096	147 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	CDKN1B	P46527	198 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	DEFB1	P60022	68 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	FAM104B	Q5XKR9	115 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	HIST2H2BD	Q6DRA6	164 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SMIM15	Q7Z3B0	74 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TMEM256	Q8N2U0	113 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	CHCHD1	Q96BP2	118 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SAMD10	Q9BYL1	202 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	LAMTOR2	Q9Y2Q5	125 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SELENOK	Q9Y6D0	94 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983		U3KQK5	164 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	HLA-DRB4	X5D2U9	266 aa		4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	FASN	P49327	2511 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB3-208	ENST00000537983	HIVEP2	P31629	2446 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TEX15	Q9BXT5	2789 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	IGHV4-28	A0A0C4DH34	117 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983		H3BVH4	76 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	NXPH4	O95158	308 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	PPBP	P02775	128 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	NTF3	P20783	257 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	S100A4	P26447	101 aa	Known RBP	4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	CMC4	P56277	68 aa	Predicted RBP	4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	DEFB131A	P59861	70 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	JOSD1	Q15040	202 aa	Predicted RBP	4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	IQCJ	Q1A5X6	159 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TDRG1	Q3Y452	100 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	PYY3	Q5JQD4	70 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SPANXN1	Q5VSR9	72 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	AMTN	Q6UX39	209 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	AMN1	Q8IY45	258 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ORMDL3	Q8N138	153 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	PRR26	Q8N8Z3	221 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	RCHY1	Q96PM5	261 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	FAM110A	Q9BQ89	295 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SCRT2	Q9NQ03	307 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	NAGK	Q9UJ70	344 aa		4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SON	P18583	2426 aa	Known RBP	4.05	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TLN2	Q9Y4G6	2542 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	GCN1	Q92616	2671 aa	Known RBP	4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983		D6R8Y8	96 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983		H3BMM0	161 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	NUPR1	O60356	82 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	HSBP1	O75506	76 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	RNASE3	P12724	160 aa	Known RBP	4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	RAB4A	P20338	218 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	PMCH	P20382	165 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	AMT	P48728	403 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	SPINK13	Q1W4C9	94 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	NSUN5P1	Q3KNT7	163 aa		4.04	□□□□□ -1.76
NPIPB3-208	ENST00000537983	MRPL51	Q4U2R6	128 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms