RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 RNASE11Q8TAA1 199 aaKnown RBP1.73□□□□□ -2.13
HIPK3-206ENST00000534262 MUCL1Q96DR8 90 aa1.73□□□□□ -2.13
HIPK3-206ENST00000534262 Q96M85 177 aa1.73□□□□□ -2.13
HIPK3-206ENST00000534262 GGACTQ9BVM4 153 aa1.73□□□□□ -2.13
HIPK3-206ENST00000534262 LINC00470Q9BZP3 86 aa1.73□□□□□ -2.13
HIPK3-206ENST00000534262 CST9LQ9H4G1 147 aa1.73□□□□□ -2.13
HIPK3-206ENST00000534262 TPRKBQ9Y3C4 175 aa1.73□□□□□ -2.13
HIPK3-206ENST00000534262 RP1P56715 2156 aa1.73□□□□□ -2.13
HIPK3-206ENST00000534262 BCORQ6W2J9 1755 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 ARFGEF2Q9Y6D5 1785 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 TRAV10A0A0B4J240 114 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 CCDC160A6NGH7 325 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 C5orf67F2Z3F1 127 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 F8W036 122 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 DLEU1O43261 78 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 TRACP01848 142 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 CD3DP04234 171 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 IGKV4-1P06312 121 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 RRAS2P62070 204 aaPredicted RBP1.72□□□□□ -2.13
HIPK3-206ENST00000534262 CTAGE3PQ8IX95 158 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 TP53RKQ96S44 253 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 SLC35B3Q9H1N7 401 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 COMMD3Q9UBI1 195 aa1.72□□□□□ -2.13
HIPK3-206ENST00000534262 METTL1Q9UBP6 276 aaKnown RBP1.72□□□□□ -2.13
HIPK3-206ENST00000534262 MON2Q7Z3U7 1717 aa1.71□□□□□ -2.13
HIPK3-206ENST00000534262 TOGARAM1Q9Y4F4 1720 aa1.71□□□□□ -2.13
HIPK3-206ENST00000534262 PLXNA3P51805 1871 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 AFDNP55196 1824 aaKnown RBP1.71□□□□□ -2.14
HIPK3-206ENST00000534262 LOC107986453A0A1B0GWG9 222 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 ZNF670-ZNF695F2Z2N8 137 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 PITX3O75364 302 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 PCOTHQ58A44 107 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 C10orf55Q5SWW7 151 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 FOXI2Q6ZQN5 318 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 OR5AS1Q8N127 324 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 MMGT1Q8N4V1 131 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 PATE1Q8WXA2 126 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 AP1S3Q96PC3 154 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 TMEM106BQ9NUM4 274 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 MPC1Q9Y5U8 109 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 COL5A3P25940 1745 aaPredicted RBP1.71□□□□□ -2.14
HIPK3-206ENST00000534262 DOCK10Q96BY6 2186 aa1.71□□□□□ -2.14
HIPK3-206ENST00000534262 CACNA1AO00555 2505 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 C9orf170A2RU37 121 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 LOC730098B7Z3J9 87 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 TPST1O60507 370 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 SMIM24O75264 130 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 IGF2P01344 180 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 CXCL8P10145 99 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 EMX2Q04743 252 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 COA5Q86WW8 74 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 DUOX1Q9NRD9 1551 aa1.7□□□□□ -2.14
HIPK3-206ENST00000534262 LSM2Q9Y333 95 aaKnown RBP1.7□□□□□ -2.14
HIPK3-206ENST00000534262 MYO5AQ9Y4I1 1855 aaKnown RBP1.7□□□□□ -2.14
HIPK3-206ENST00000534262 MICAL3Q7RTP6 2002 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 DDX60Q8IY21 1712 aaKnown RBP1.69□□□□□ -2.14
HIPK3-206ENST00000534262 ANKRD26Q9UPS8 1709 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 FREM3P0C091 2139 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 TRBV20-1A0A075B6N2 111 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 ERC2-IT1O76042 136 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 LSM3P62310 102 aaKnown RBP1.69□□□□□ -2.14
HIPK3-206ENST00000534262 GLIPR1L1Q6UWM5 242 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 ZCCHC23Q6ZST2 131 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 CLECL1Q8IZS7 167 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 OTOSQ8NHW6 89 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 CST11Q9H112 138 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 PTPRZ1P23471 2315 aaPredicted RBP1.69□□□□□ -2.14
HIPK3-206ENST00000534262 BAZ2BQ9UIF8 2168 aaKnown RBP1.69□□□□□ -2.14
HIPK3-206ENST00000534262 NCOR1O75376 2440 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 BAHCC1Q9P281 2608 aa1.69□□□□□ -2.14
HIPK3-206ENST00000534262 MYH10P35580 1976 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 CEP290O15078 2479 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 PKD1L2Q7Z442 2459 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 MUC6Q6W4X9 2439 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 J3QR89 54 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 J3QRE1 110 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 GNG7O60262 68 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 IL9P15248 144 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 HIST1H1BP16401 226 aaKnown RBP1.68□□□□□ -2.14
HIPK3-206ENST00000534262 BRS3P32247 399 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 DEFB103AP81534 67 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 PLGLB1Q02325 96 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 MIR22HGQ0VDD5 57 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 CCSMST1Q4G0I0 132 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 C2orf82Q6UX34 121 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.68□□□□□ -2.14
HIPK3-206ENST00000534262 ARL11Q969Q4 196 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 NAA38Q9BRA0 125 aaKnown RBP1.68□□□□□ -2.14
HIPK3-206ENST00000534262 ANAPC1Q9H1A4 1944 aa1.68□□□□□ -2.14
HIPK3-206ENST00000534262 TTC28Q96AY4 2481 aa1.67□□□□□ -2.14
HIPK3-206ENST00000534262 SCN11AQ9UI33 1791 aa1.67□□□□□ -2.14
HIPK3-206ENST00000534262 TJP1Q07157 1748 aa1.67□□□□□ -2.14
HIPK3-206ENST00000534262 ZNF736B4DX44 427 aaPredicted RBP1.67□□□□□ -2.14
HIPK3-206ENST00000534262 J3QKU1 62 aa1.67□□□□□ -2.14
HIPK3-206ENST00000534262 M0R2P5 195 aa1.67□□□□□ -2.14
HIPK3-206ENST00000534262 CCL16O15467 120 aa1.67□□□□□ -2.14
HIPK3-206ENST00000534262 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
HIPK3-206ENST00000534262 IGHV3-33P01772 117 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms