RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 IGF2RP11717 2491 aa0.06□□□□□ -2.4
BRCA2-205ENST00000533776 LRP1Q07954 4544 aaKnown RBP0.06□□□□□ -2.4
BRCA2-205ENST00000533776 MED13LQ71F56 2210 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 A0A087WTM6 91 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 ARPC5O15511 151 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 OR2H2O95918 312 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 CCKP06307 115 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 KLKP1Q107X0 134 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 IQCJQ1A5X6 159 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 OR2T2Q6IF00 324 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 AKAP14Q86UN6 197 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 AP1S3Q96PC3 154 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 BANF2Q9H503 90 aa0.05□□□□□ -2.4
BRCA2-205ENST00000533776 ANKRD17O75179 2603 aaKnown RBP0.05□□□□□ -2.4
BRCA2-205ENST00000533776 CEP152O94986 1710 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 UHRF1BP1LA0JNW5 1464 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 SSC5DA1L4H1 1573 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 TRBV10-1A0A0K0K1A3 114 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 PNMA8CA0A1B0GUJ8 204 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 SCGB1A1P11684 91 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 HIST1H1BP16401 226 aaKnown RBP0.04□□□□□ -2.4
BRCA2-205ENST00000533776 KDELR1P24390 212 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 PSPHP78330 225 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 PLGLB1Q02325 96 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 EMX2Q04743 252 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 SPINK13Q1W4C9 94 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 TCTE3Q8IZS6 198 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 AIF1LQ9BQI0 150 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 ATG5Q9H1Y0 275 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 AKAP11Q9UKA4 1901 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 MYH13Q9UKX3 1938 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 KDM6BO15054 1643 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 ARHGEF10O15013 1369 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 TNS1Q9HBL0 1735 aaKnown RBP0.04□□□□□ -2.4
BRCA2-205ENST00000533776 LAMB1P07942 1786 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 PRG4Q92954 1404 aaPredicted RBP0.04□□□□□ -2.4
BRCA2-205ENST00000533776 ZFYVE26Q68DK2 2539 aa0.04□□□□□ -2.4
BRCA2-205ENST00000533776 ERCC6Q03468 1493 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 BORCS7-ASMTA0A0B4J1R7 106 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 FAM236AA0A1B0GUQ0 79 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 FAM236BA0A1B0GV22 79 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 M0R2P5 195 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 MPC1LP0DKB6 136 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 PYYP10082 97 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 SLC25A6P12236 298 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 ELOF1P60002 83 aaKnown RBP0.03□□□□□ -2.4
BRCA2-205ENST00000533776 NPC2P61916 151 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 TSKUQ8WUA8 353 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 TMEM14BQ9NUH8 114 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 PHIPQ8WWQ0 1821 aa0.03□□□□□ -2.4
BRCA2-205ENST00000533776 MYH6P13533 1939 aa0.03□□□□□ -2.41
BRCA2-205ENST00000533776 COL7A1Q02388 2944 aa0.03□□□□□ -2.41
BRCA2-205ENST00000533776 CACNA1HO95180 2353 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
BRCA2-205ENST00000533776 JMJD1CQ15652 2540 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 FXYD1O00168 92 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 TSPAN19P0C672 248 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 IGLC6P0CF74 106 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 LINC00694P0DN24 101 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 CMPK1P30085 196 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 POLR2JP52435 117 aaKnown RBP0.02□□□□□ -2.41
BRCA2-205ENST00000533776 LSM3P62310 102 aaKnown RBP0.02□□□□□ -2.41
BRCA2-205ENST00000533776 HIST1H1AQ02539 215 aaPredicted RBP0.02□□□□□ -2.41
BRCA2-205ENST00000533776 CCDC153Q494R4 210 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 CLLU1Q5K131 121 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 ATP11AUNQ6ZP68 121 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 SNX29P2Q8IUI4 249 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 ATP6V0E2Q8NHE4 81 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 PPDPFLQ8WWR9 84 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 PYDC1Q8WXC3 89 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 CCDC171Q6TFL3 1326 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 SPAG17Q6Q759 2223 aa0.02□□□□□ -2.41
BRCA2-205ENST00000533776 F5P12259 2224 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 TRAV2A0A0B4J234 112 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 TRAV17A0A0B4J275 112 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 CLPSL1A2RUU4 121 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 FXYD6P3P58550 94 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 ALX1Q15699 326 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 DYNLRB2Q8TF09 96 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 IFI27L1Q96BM0 104 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 Q96NJ1 140 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 PROK2Q9HC23 129 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 TAS2R8Q9NYW2 309 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 CALML5Q9NZT1 146 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 OVOS2A0A0J9YW53 1432 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 OVOS2Q6IE36 1432 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 NRXN2Q9P2S2 1712 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 TTC28Q96AY4 2481 aa0.01□□□□□ -2.41
BRCA2-205ENST00000533776 OTOGQ6ZRI0 2925 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 TRBV20-1A0A075B6N2 111 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 TEX49A0A1B0GTD5 131 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 M0R129 80 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 SIPA1L3O60292 1781 aaPredicted RBP0□□□□□ -2.41
BRCA2-205ENST00000533776 SMIM24O75264 130 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 DBIP07108 87 aaKnown RBP0□□□□□ -2.41
BRCA2-205ENST00000533776 CCL3L1P16619 93 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 CKS1BP61024 79 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 LINC01545Q5VT33 79 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 UNQ5815/PRO19632Q6UWF5 114 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 SPANXA1Q9NS26 97 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms