RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 M0R2Z0 102 aa8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 MIFP14174 115 aa8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 SPINK13Q1W4C9 94 aa8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 Q6ZQT7 251 aa8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 TRPT1Q86TN4 253 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 RPP21Q9H633 154 aaKnown RBP8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC4-213ENST00000533149 TRAV12-2A0A075B6T6 113 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 TRAV21A0A0B4J279 112 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 IGHV4-28A0A0C4DH34 117 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 C7orf71A4D174 169 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 ORM1P02763 201 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 PFN1P07737 140 aaKnown RBP8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 RBMY1A1P0DJD3 496 aaKnown RBP8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 RBMY1CP0DJD4 496 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 CDKN1BP46527 198 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 Q6AWC8 147 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 IL36BQ9NZH7 164 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 C11orf21Q9P2W6 132 aa8.06□□□□□ -1.12
TRAPPC4-213ENST00000533149 TMSB15BA0A087X1C1 80 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 TRAV12-3A0A0B4J271 114 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 A8MWL6 223 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 EPM2AB3EWF7 344 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 ZNF324O75467 553 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 INAFM2P0DMQ5 153 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 FAM3BP58499 235 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 RPL19P84098 196 aaKnown RBP8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 GFI1BQ5VTD9 330 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 IMMP2LQ96T52 175 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 URGCP-MRPS24S4R325 110 aa8.05□□□□□ -1.12
TRAPPC4-213ENST00000533149 IGKV3D-20A0A0C4DH25 116 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 SMIM27A0A1W2PRY6 76 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 CRXO43186 299 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 GZMBP10144 247 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 S100PP25815 95 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 TCL1AP56279 114 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 RPS20P60866 119 aaKnown RBP8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 TNP2Q05952 138 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 LINC01559Q495D7 138 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 CT83Q5H943 113 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 TSKUQ8WUA8 353 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 AGRNO00468 2067 aa8.04□□□□□ -1.12
TRAPPC4-213ENST00000533149 GRIFINA4D1Z8 144 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 NUTF2P61970 127 aaKnown RBP8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 ELOBQ15370 118 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 KCNIP4Q6PIL6 250 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 YPEL4Q96NS1 127 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 NAGKQ9UJ70 344 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 XKRY2A2RUG3 117 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 COLCA2A8K830 154 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 C12orf74Q32Q52 190 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 MORN3Q6PF18 240 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 GTSF1Q8WW33 167 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 FAM210BQ96KR6 192 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 NEU1Q99519 415 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 XCL2Q9UBD3 114 aa8.03□□□□□ -1.12
TRAPPC4-213ENST00000533149 IGHV1OR15-1A0A075B7D0 117 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 FAM231BA6NCW3 169 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 GNRH2O43555 120 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 CXCL1P09341 107 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 GIG44P09565 113 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 FOXA3P55318 350 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 FAM159AQ6UWV7 190 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 NUP35Q8NFH5 326 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 PGLYRP4Q96LB8 373 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 PYGO2Q9BRQ0 406 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 GFRA4Q9GZZ7 299 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 NAT8BQ9UHF3 227 aa8.02□□□□□ -1.13
TRAPPC4-213ENST00000533149 TRBV24-1A0A075B6N3 115 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 A0A1W2PPQ1 181 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 HIGD1CA8MV81 97 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 SPINK4O60575 86 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 INSP01308 110 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 KCNS1Q96KK3 526 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 LINC01587Q99440 93 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 C20orf144Q9BQM9 153 aa8.01□□□□□ -1.13
TRAPPC4-213ENST00000533149 TRAV9-1A0A075B6T8 112 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 IGLC6P0CF74 106 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 TDRG1Q3Y452 100 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
TRAPPC4-213ENST00000533149 C1orf158Q8N1D5 194 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 FER1L6-AS1Q8NA97 138 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 BTF3L4Q96K17 158 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 CELA1Q9UNI1 258 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 X6R8D5 127 aa8□□□□□ -1.13
TRAPPC4-213ENST00000533149 PRM2P04554 102 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 TYMSP04818 313 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 ASIPP42127 132 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 SPATA12Q7Z6I5 190 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 TMEM208Q9BTX3 173 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 TPPP3Q9BW30 176 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 C1QTNF4Q9BXJ3 329 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 TP53TG3Q9ULZ0 132 aa7.99□□□□□ -1.13
TRAPPC4-213ENST00000533149 IGHV3OR16-12A0A075B7B8 117 aa7.98□□□□□ -1.13
TRAPPC4-213ENST00000533149 MUC21A0A0G2JKD1 596 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 687.4 ms