RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CFHR4Q92496 578 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 NCKAP5O14513 1909 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 HIST1H4AP62805 103 aaKnown RBP8.76□□□□□ -1.01
PTPRK-221ENST00000532331 MRPL23Q16540 153 aaKnown RBP8.76□□□□□ -1.01
PTPRK-221ENST00000532331 LGALS9BQ3B8N2 356 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 LGALS9CQ6DKI2 356 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 CTSGP08311 255 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 ANAPC13Q9BS18 74 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 Q9HAA7 133 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 C10orf91Q5T1B1 145 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 GNRH2O43555 120 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 HERVK_113P63121 156 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 POLR3KQ9Y2Y1 108 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-221ENST00000532331 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 C16orf54Q6UWD8 224 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 C20orf144Q9BQM9 153 aa8.75□□□□□ -1.01
PTPRK-221ENST00000532331 CRLF1O75462 422 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 FSTL3O95633 263 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 ODF3BA8MYP8 253 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 C9JAW5 83 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 EGR2P11161 476 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-221ENST00000532331 SNHG12Q9BXW3 62 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 DLEU1O43261 78 aa8.74□□□□□ -1.01
PTPRK-221ENST00000532331 F8VRH5 84 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 MRPL35Q9NZE8 188 aaKnown RBP8.73□□□□□ -1.01
PTPRK-221ENST00000532331 PCDH15Q96QU1 1955 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 K7EN84 100 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 NXPH4O95158 308 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 CRYGCP07315 174 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 PKIGQ9Y2B9 76 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 IGF2RP11717 2491 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 DOCK11Q5JSL3 2073 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 C10orf142B7Z368 130 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 ASPHD1Q5U4P2 390 aa8.73□□□□□ -1.01
PTPRK-221ENST00000532331 C1orf43Q9BWL3 253 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 PRSS29PA6NIE9 313 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 UBE2V1Q13404 147 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 OCIAD2Q56VL3 154 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 Q6ZSV7 163 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 IGHG4P01861 327 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 ZFAND6Q6FIF0 208 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 GAGE2AQ6NT46 116 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 MUC22E2RYF6 1773 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-221ENST00000532331 CSPG4Q6UVK1 2322 aa8.72□□□□□ -1.01
PTPRK-221ENST00000532331 KLF5Q13887 457 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-221ENST00000532331 IGLL5B9A064 214 aa8.71□□□□□ -1.01
PTPRK-221ENST00000532331 K7EMI3 77 aa8.71□□□□□ -1.01
PTPRK-221ENST00000532331 IGKV1-17P01599 117 aa8.71□□□□□ -1.01
PTPRK-221ENST00000532331 GYPEP15421 78 aa8.71□□□□□ -1.01
PTPRK-221ENST00000532331 TMEM126AQ9H061 195 aa8.71□□□□□ -1.01
PTPRK-221ENST00000532331 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.01
PTPRK-221ENST00000532331 Q6ZWC4 215 aa8.71□□□□□ -1.01
PTPRK-221ENST00000532331 TEX22C9J3V5 150 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 H3BMM0 161 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 SPRY2O43597 315 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 UBE2WQ96B02 151 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 IGLL1P15814 213 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 Q6ZQT7 251 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 DEFB125Q8N687 156 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 TNRC6AQ8NDV7 1962 aaKnown RBP8.71□□□□□ -1.02
PTPRK-221ENST00000532331 LYPD6Q86Y78 171 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 MBD6Q96DN6 1003 aa8.71□□□□□ -1.02
PTPRK-221ENST00000532331 DEFB4AO15263 64 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 TMEM61Q8N0U2 210 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 TRBV20-1A0A075B6N2 111 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 BUB3O43684 328 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 SPINK8P0C7L1 97 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 COX8AP10176 69 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 J3QQQ9 107 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 LYPD6BQ8NI32 183 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
PTPRK-221ENST00000532331 HILS1P60008 231 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 ESM1Q9NQ30 184 aa8.7□□□□□ -1.02
PTPRK-221ENST00000532331 SOCS3O14543 225 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 COX11Q9Y6N1 276 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 DSCAMO60469 2012 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 CDSNQ15517 529 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
PTPRK-221ENST00000532331 ADAMTSL5Q6ZMM2 481 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 INAFM2P0DMQ5 153 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 IGLC2P0DOY2 106 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 IGLC3P0DOY3 106 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 ATP6V0E2Q8NHE4 81 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 ZNF106Q9H2Y7 1883 aaKnown RBP8.69□□□□□ -1.02
PTPRK-221ENST00000532331 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
PTPRK-221ENST00000532331 ATRXP46100 2492 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 KRTAP10-9P60411 292 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 PATE2Q6UY27 113 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 SHANK1Q9Y566 2161 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 DYSFO75923 2080 aa8.68□□□□□ -1.02
PTPRK-221ENST00000532331 TRBV12-3P01733 135 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms