RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ZNF575Q86XF7 245 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 PTH2Q96A98 100 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 SFRP2Q96HF1 295 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 NDUFAF3Q9BU61 184 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 RNASE7Q9H1E1 156 aaKnown RBP8.97□□□□□ -0.97
COPB1-208ENST00000532088 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
COPB1-208ENST00000532088 IL36BQ9NZH7 164 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 TIMM8BQ9Y5J9 83 aaPredicted RBP8.97□□□□□ -0.97
COPB1-208ENST00000532088 U3KQK5 164 aa8.97□□□□□ -0.97
COPB1-208ENST00000532088 M0R036 132 aa8.96□□□□□ -0.98
COPB1-208ENST00000532088 PPP1R2P9O14990 202 aa8.96□□□□□ -0.98
COPB1-208ENST00000532088 GNRH2O43555 120 aa8.96□□□□□ -0.98
COPB1-208ENST00000532088 GATCO43716 136 aaKnown RBP8.96□□□□□ -0.98
COPB1-208ENST00000532088 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
COPB1-208ENST00000532088 OR2D3Q8NGH3 330 aa8.96□□□□□ -0.98
COPB1-208ENST00000532088 C9orf85Q96MD7 179 aa8.96□□□□□ -0.98
COPB1-208ENST00000532088 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 FAM231BA6NCW3 169 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 A8MWL6 223 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 S100A4P26447 101 aaKnown RBP8.95□□□□□ -0.98
COPB1-208ENST00000532088 OR10G8Q8NGN5 311 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 GFRA4Q9GZZ7 299 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 SCRT2Q9NQ03 307 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 GSN-AS1Q9NRJ2 163 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 MDFICQ9P1T7 246 aa8.95□□□□□ -0.98
COPB1-208ENST00000532088 M0R2P5 195 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 SNAI2O43623 268 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 SPINK4O60575 86 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 PRM2P04554 102 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 OR5AL1P0C617 328 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 IGLC6P0CF74 106 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
COPB1-208ENST00000532088 FOXA3P55318 350 aaPredicted RBP8.94□□□□□ -0.98
COPB1-208ENST00000532088 RPL19P84098 196 aaKnown RBP8.94□□□□□ -0.98
COPB1-208ENST00000532088 SLC7A5P1Q8MH63 180 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 C18orf15Q96N68 181 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 EDA2RQ9HAV5 297 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 DKK2Q9UBU2 259 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 V9GYV3 84 aa8.94□□□□□ -0.98
COPB1-208ENST00000532088 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
COPB1-208ENST00000532088 F2Z2F3 143 aa8.93□□□□□ -0.98
COPB1-208ENST00000532088 MT-ND4LP03901 98 aa8.93□□□□□ -0.98
COPB1-208ENST00000532088 RHEBQ15382 184 aa8.93□□□□□ -0.98
COPB1-208ENST00000532088 WDR73Q6P4I2 378 aa8.93□□□□□ -0.98
COPB1-208ENST00000532088 TSKUQ8WUA8 353 aa8.93□□□□□ -0.98
COPB1-208ENST00000532088 RASL10AQ92737 203 aa8.93□□□□□ -0.98
COPB1-208ENST00000532088 TMSB15BA0A087X1C1 80 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 GRIFINA4D1Z8 144 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 ARMS2P0C7Q2 107 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 FAM222AQ5U5X8 452 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 SVBPQ8N300 66 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 FER1L6-AS1Q8NA97 138 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 CTDSP1Q9GZU7 261 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 NOP10Q9NPE3 64 aaKnown RBP8.92□□□□□ -0.98
COPB1-208ENST00000532088 TMEM242Q9NWH2 141 aa8.92□□□□□ -0.98
COPB1-208ENST00000532088 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 A0A087WWC5 75 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 CXorf65A6NEN9 183 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 H3BVH4 76 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 DEFB4AO15263 64 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 NXPH4O95158 308 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 CTRLP40313 264 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 EMP1P54849 157 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 CACNG7P62955 275 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 RNF212Q495C1 297 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 ZFP82Q8N141 532 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 SYT8Q8NBV8 401 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 CLRN3Q8NCR9 226 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 PHLDA3Q9Y5J5 127 aa8.91□□□□□ -0.98
COPB1-208ENST00000532088 SMIM27A0A1W2PRY6 76 aa8.9□□□□□ -0.98
COPB1-208ENST00000532088 C9orf118A6NHY6 69 aa8.9□□□□□ -0.98
COPB1-208ENST00000532088 CIDEAO60543 219 aa8.9□□□□□ -0.98
COPB1-208ENST00000532088 SNAPINO95295 136 aa8.9□□□□□ -0.98
COPB1-208ENST00000532088 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.98
COPB1-208ENST00000532088 IMMP2LQ96T52 175 aa8.9□□□□□ -0.98
COPB1-208ENST00000532088 TRGV1A0A0A0MS02 117 aa8.89□□□□□ -0.99
COPB1-208ENST00000532088 APOC3P02656 99 aa8.89□□□□□ -0.99
COPB1-208ENST00000532088 GZMBP10144 247 aa8.89□□□□□ -0.99
COPB1-208ENST00000532088 ZNF876PQ49A33 203 aa8.89□□□□□ -0.99
COPB1-208ENST00000532088 GTSF1Q8WW33 167 aa8.89□□□□□ -0.99
COPB1-208ENST00000532088 NAT8BQ9UHF3 227 aa8.89□□□□□ -0.99
COPB1-208ENST00000532088 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
COPB1-208ENST00000532088 NBEAL2Q6ZNJ1 2754 aa8.88□□□□□ -0.99
COPB1-208ENST00000532088 A8MWV9 139 aa8.88□□□□□ -0.99
COPB1-208ENST00000532088 DAD1P61803 113 aa8.88□□□□□ -0.99
COPB1-208ENST00000532088 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
COPB1-208ENST00000532088 Q6ZTI0 123 aa8.88□□□□□ -0.99
COPB1-208ENST00000532088 TRAV4A0A0B4J268 109 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 C7orf77A4D0Y5 90 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 HIGD1CA8MV81 97 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 LYZL1Q6UWQ5 148 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 OR10AG1Q8NH19 301 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 BORCS7Q96B45 105 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 KRTAP9-9Q9BYP9 154 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 KRTAP9-4Q9BYQ2 154 aa8.87□□□□□ -0.99
COPB1-208ENST00000532088 MRPL16Q9NX20 251 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms