RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 A0A1W2PPR1 153 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 ZFP92A6NM28 416 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 CD52P31358 61 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 RPL7L1Q6DKI1 246 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 C2orf91Q6ZV80 131 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 UPK3BQ9BT76 320 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 UTRNP46939 3433 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 ZNF736B4DX44 427 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 IGKV1D-33P01593 117 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 IGKV1-33P01594 117 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 PRH1P02810 166 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 TRGV3P03979 118 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 COX8AP10176 69 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 COX6A1P12074 109 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 UBE2G1P62253 170 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 SYCNQ0VAF6 134 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 Q6ZQT7 251 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 CNEP1R1Q8N9A8 125 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 HHLA3Q9XRX5 114 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
ECHDC1-222ENST00000531967 TRAV1-1A0A0B4J248 108 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 IGHV1-3A0A0C4DH29 117 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 SLC25A20O43772 301 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 GIG44P09565 113 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 PIRTP0C851 137 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 SLC25A16P16260 332 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 MPV17P39210 176 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 NPC2P61916 151 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 CFAP126Q5VTH2 177 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 PATE2Q6UY27 113 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 Q8N2B8 174 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 C10orf105Q8TEF2 133 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 OR8B2Q96RD0 313 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 CMC2Q9NRP2 79 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 ARL2-SNX15V9GYD0 113 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 IGLV2-11P01706 119 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 IGHV1-46P01743 117 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 GYPBP06028 91 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 ARID1AO14497 2285 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 PCNTO95613 3336 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 TRGV5A0A0B4J1U4 118 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 LECT2O14960 151 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 SSSCA1O60232 199 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 SH2D1AO60880 128 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 TCL1BO95988 128 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 IGHV1-69P01742 117 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 IGKCP01834 107 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 C15orf53Q8NAA6 179 aa3.57□□□□□ -1.84
ECHDC1-222ENST00000531967 EML5Q05BV3 1969 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 IGLV3-16A0A075B6K0 115 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 MDFIC2A0A1B0GVS7 189 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 HMGN4O00479 90 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 PIN1P1O15428 100 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 CLDND2Q8NHS1 167 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 HILPDAQ9Y5L2 63 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 HEATR5AQ86XA9 2040 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 DNAH12Q6ZR08 3092 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 CXorf51AA0A1B0GTR3 108 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 TMEM223A0PJW6 202 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 PINLYPA6NC86 204 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 C17orf51A8MQB3 221 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 CYP2G1PQ6ZSU1 146 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 MYOZ3Q8TDC0 251 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 DPH3P1Q9H4G8 78 aa3.56□□□□□ -1.84
ECHDC1-222ENST00000531967 IGLV3-9A0A075B6K5 115 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 TRAV2A0A0B4J234 112 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 hADV29S1A0JD25 119 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 C19orf71A6NCJ1 209 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 A6NDX4 124 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 CYSRT1A8MQ03 144 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 J3QLW9 94 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 K7EM74 188 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 NANOS3P60323 173 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 CRIP3Q6Q6R5 217 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 IGFL3Q6UXB1 125 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 POM121L12Q8N7R1 296 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 Q8N9W7 124 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 IGHV3-64DA0A0J9YX35 117 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 H3BMM0 161 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 LY6HO94772 140 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 PCBD1P61457 104 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 C2orf83Q53S99 150 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 MIC13Q5XKP0 118 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 FAM216BQ8N7L0 139 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 PFN4Q8NHR9 129 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 UBE2WQ96B02 151 aa3.55□□□□□ -1.84
ECHDC1-222ENST00000531967 TRPM6Q9BX84 2022 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 C11orf94C9JXX5 98 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 ATOX1O00244 68 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 NPYP01303 97 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 IL9P15248 144 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 FXYD6P3P58550 94 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 BLCAPP62952 87 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 MRPS36P82909 103 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 LINC01560Q8TB33 94 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 SMCR5Q8TEV8 140 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms